Gene : Medtr3g037570 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10657 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Description:  peptidylprolyl cis/trans isomerase, NIMA-interacting protein
Genomic Order:  1566 Name:  ? Medtr3g037570
Secondary Identifier:  ? PAC:31053385
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g037570 0.5kb upstream 0.5kb upstream 4114 true chr3: 13804307-13808420 Medicago truncatula
Medtr3g037570 0.5kb upstream 0.5kb upstream 500 false chr3: 13807921-13808420 Medicago truncatula
Medtr3g037570 0.5kb downstream 0.5kb downstream 4114 true chr3: 13803807-13807920 Medicago truncatula
Medtr3g037570 0.5kb downstream 0.5kb downstream 500 false chr3: 13803807-13804306 Medicago truncatula
Medtr3g037570 1.0kb upstream 1.0kb upstream 4614 true chr3: 13804307-13808920 Medicago truncatula
Medtr3g037570 1.0kb upstream 1.0kb upstream 1000 false chr3: 13807921-13808920 Medicago truncatula
Medtr3g037570 1.0kb downstream 1.0kb downstream 4614 true chr3: 13803307-13807920 Medicago truncatula
Medtr3g037570 1.0kb downstream 1.0kb downstream 1000 false chr3: 13803307-13804306 Medicago truncatula
Medtr3g037570 2.0kb upstream 2.0kb upstream 5614 true chr3: 13804307-13809920 Medicago truncatula
Medtr3g037570 2.0kb upstream 2.0kb upstream 2000 false chr3: 13807921-13809920 Medicago truncatula
Medtr3g037570 2.0kb downstream 2.0kb downstream 5614 true chr3: 13802307-13807920 Medicago truncatula
Medtr3g037570 2.0kb downstream 2.0kb downstream 2000 false chr3: 13802307-13804306 Medicago truncatula
Medtr3g037570 5.0kb upstream 5.0kb upstream 8614 true chr3: 13804307-13812920 Medicago truncatula
Medtr3g037570 5.0kb upstream 5.0kb upstream 5000 false chr3: 13807921-13812920 Medicago truncatula
Medtr3g037570 5.0kb downstream 5.0kb downstream 8614 true chr3: 13799307-13807920 Medicago truncatula
Medtr3g037570 5.0kb downstream 5.0kb downstream 5000 false chr3: 13799307-13804306 Medicago truncatula
Medtr3g037570 10.0kb upstream 10.0kb upstream 13614 true chr3: 13804307-13817920 Medicago truncatula
Medtr3g037570 10.0kb upstream 10.0kb upstream 10000 false chr3: 13807921-13817920 Medicago truncatula
Medtr3g037570 10.0kb downstream 10.0kb downstream 13614 true chr3: 13794307-13807920 Medicago truncatula
Medtr3g037570 10.0kb downstream 10.0kb downstream 10000 false chr3: 13794307-13804306 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304303 5265 Fabidae View MSA
124050383 5270 Rosid View MSA
123750072 5271 Pentapetalae View MSA
122789506 5272 Eudicot View MSA
122046490 5273 Angiosperm View MSA
123429014 5275 Viridiplantae View MSA
121345205 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.01     High Low
cufflinks 14.019     High  
cufflinks 19.577     High High
cufflinks 13.54     High  
cufflinks 15.138     High  
cufflinks 16.044     High  
cufflinks 14.485     High  
cufflinks 14.036     High  
cufflinks 18.598     High High

0 Strain