Gene : Medtr3g019310 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR20978:SF0 - SPLICING FACTOR 3B SUBUNIT 5 Description:  splicing factor 3B subunit 5/RDS3 complex subunit 10
Genomic Order:  679 Name:  ? Medtr3g019310
Secondary Identifier:  ? PAC:31054242
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g019310 0.5kb upstream 0.5kb upstream 4020 true chr3: 5393109-5397128 Medicago truncatula
Medtr3g019310 0.5kb upstream 0.5kb upstream 500 false chr3: 5396629-5397128 Medicago truncatula
Medtr3g019310 0.5kb downstream 0.5kb downstream 4020 true chr3: 5392609-5396628 Medicago truncatula
Medtr3g019310 0.5kb downstream 0.5kb downstream 500 false chr3: 5392609-5393108 Medicago truncatula
Medtr3g019310 1.0kb upstream 1.0kb upstream 4520 true chr3: 5393109-5397628 Medicago truncatula
Medtr3g019310 1.0kb upstream 1.0kb upstream 1000 false chr3: 5396629-5397628 Medicago truncatula
Medtr3g019310 1.0kb downstream 1.0kb downstream 4520 true chr3: 5392109-5396628 Medicago truncatula
Medtr3g019310 1.0kb downstream 1.0kb downstream 1000 false chr3: 5392109-5393108 Medicago truncatula
Medtr3g019310 2.0kb upstream 2.0kb upstream 5520 true chr3: 5393109-5398628 Medicago truncatula
Medtr3g019310 2.0kb upstream 2.0kb upstream 2000 false chr3: 5396629-5398628 Medicago truncatula
Medtr3g019310 2.0kb downstream 2.0kb downstream 5520 true chr3: 5391109-5396628 Medicago truncatula
Medtr3g019310 2.0kb downstream 2.0kb downstream 2000 false chr3: 5391109-5393108 Medicago truncatula
Medtr3g019310 5.0kb upstream 5.0kb upstream 8520 true chr3: 5393109-5401628 Medicago truncatula
Medtr3g019310 5.0kb upstream 5.0kb upstream 5000 false chr3: 5396629-5401628 Medicago truncatula
Medtr3g019310 5.0kb downstream 5.0kb downstream 8520 true chr3: 5388109-5396628 Medicago truncatula
Medtr3g019310 5.0kb downstream 5.0kb downstream 5000 false chr3: 5388109-5393108 Medicago truncatula
Medtr3g019310 10.0kb upstream 10.0kb upstream 13520 true chr3: 5393109-5406628 Medicago truncatula
Medtr3g019310 10.0kb upstream 10.0kb upstream 10000 false chr3: 5396629-5406628 Medicago truncatula
Medtr3g019310 10.0kb downstream 10.0kb downstream 13520 true chr3: 5383109-5396628 Medicago truncatula
Medtr3g019310 10.0kb downstream 10.0kb downstream 10000 false chr3: 5383109-5393108 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027648 5273 Angiosperm View MSA
122259458 5265 Fabidae Singleton cluster - no MSA
124042059 5270 Rosid View MSA
123755175 5271 Pentapetalae View MSA
122776472 5272 Eudicot View MSA
123428927 5275 Viridiplantae View MSA
121347588 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.148        
cufflinks 2.745       Low
cufflinks 3.144        
cufflinks 5.168        
cufflinks 3.53        
cufflinks 6.29       High
cufflinks 5.725       High
cufflinks 2.704       Low
cufflinks 5.454        

0 Strain