Gene : Medtr3g018770 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12768 - BECLIN 1 Description:  autophagy protein beclin 1
Genomic Order:  647 Name:  ? Medtr3g018770
Secondary Identifier:  ? PAC:31058315
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g018770 0.5kb upstream 0.5kb upstream 9240 true chr3: 5165317-5174556 Medicago truncatula
Medtr3g018770 0.5kb upstream 0.5kb upstream 500 false chr3: 5165317-5165816 Medicago truncatula
Medtr3g018770 0.5kb downstream 0.5kb downstream 9240 true chr3: 5165817-5175056 Medicago truncatula
Medtr3g018770 0.5kb downstream 0.5kb downstream 500 false chr3: 5174557-5175056 Medicago truncatula
Medtr3g018770 1.0kb upstream 1.0kb upstream 9740 true chr3: 5164817-5174556 Medicago truncatula
Medtr3g018770 1.0kb upstream 1.0kb upstream 1000 false chr3: 5164817-5165816 Medicago truncatula
Medtr3g018770 1.0kb downstream 1.0kb downstream 9740 true chr3: 5165817-5175556 Medicago truncatula
Medtr3g018770 1.0kb downstream 1.0kb downstream 1000 false chr3: 5174557-5175556 Medicago truncatula
Medtr3g018770 2.0kb upstream 2.0kb upstream 10740 true chr3: 5163817-5174556 Medicago truncatula
Medtr3g018770 2.0kb upstream 2.0kb upstream 2000 false chr3: 5163817-5165816 Medicago truncatula
Medtr3g018770 2.0kb downstream 2.0kb downstream 10740 true chr3: 5165817-5176556 Medicago truncatula
Medtr3g018770 2.0kb downstream 2.0kb downstream 2000 false chr3: 5174557-5176556 Medicago truncatula
Medtr3g018770 5.0kb upstream 5.0kb upstream 13740 true chr3: 5160817-5174556 Medicago truncatula
Medtr3g018770 5.0kb upstream 5.0kb upstream 5000 false chr3: 5160817-5165816 Medicago truncatula
Medtr3g018770 5.0kb downstream 5.0kb downstream 13740 true chr3: 5165817-5179556 Medicago truncatula
Medtr3g018770 5.0kb downstream 5.0kb downstream 5000 false chr3: 5174557-5179556 Medicago truncatula
Medtr3g018770 10.0kb upstream 10.0kb upstream 18740 true chr3: 5155817-5174556 Medicago truncatula
Medtr3g018770 10.0kb upstream 10.0kb upstream 10000 false chr3: 5155817-5165816 Medicago truncatula
Medtr3g018770 10.0kb downstream 10.0kb downstream 18740 true chr3: 5165817-5184556 Medicago truncatula
Medtr3g018770 10.0kb downstream 10.0kb downstream 10000 false chr3: 5174557-5184556 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300464 5265 Fabidae View MSA
124064033 5270 Rosid View MSA
123737768 5271 Pentapetalae View MSA
122791932 5272 Eudicot View MSA
122047778 5273 Angiosperm View MSA
121344553 5274 Embryophyte View MSA
123428819 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.675        
cufflinks 4.485        
cufflinks 4.576        
cufflinks 2.245       Low
cufflinks 4.555        
cufflinks 1.521       Low
cufflinks 4.313        
cufflinks 4.421        
cufflinks 2.426        

0 Strain