Gene : Medtr3g017470 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR28626:SF3 - SRR1-LIKE PROTEIN Description:  sensitivity TO RED LIGHT reduced protein
Genomic Order:  628 Name:  ? Medtr3g017470
Secondary Identifier:  ? PAC:31054593
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g017470 0.5kb upstream 0.5kb upstream 4097 true chr3: 4972528-4976624 Medicago truncatula
Medtr3g017470 0.5kb upstream 0.5kb upstream 500 false chr3: 4972528-4973027 Medicago truncatula
Medtr3g017470 0.5kb downstream 0.5kb downstream 4097 true chr3: 4973028-4977124 Medicago truncatula
Medtr3g017470 0.5kb downstream 0.5kb downstream 500 false chr3: 4976625-4977124 Medicago truncatula
Medtr3g017470 1.0kb upstream 1.0kb upstream 4597 true chr3: 4972028-4976624 Medicago truncatula
Medtr3g017470 1.0kb upstream 1.0kb upstream 1000 false chr3: 4972028-4973027 Medicago truncatula
Medtr3g017470 1.0kb downstream 1.0kb downstream 4597 true chr3: 4973028-4977624 Medicago truncatula
Medtr3g017470 1.0kb downstream 1.0kb downstream 1000 false chr3: 4976625-4977624 Medicago truncatula
Medtr3g017470 2.0kb upstream 2.0kb upstream 5597 true chr3: 4971028-4976624 Medicago truncatula
Medtr3g017470 2.0kb upstream 2.0kb upstream 2000 false chr3: 4971028-4973027 Medicago truncatula
Medtr3g017470 2.0kb downstream 2.0kb downstream 5597 true chr3: 4973028-4978624 Medicago truncatula
Medtr3g017470 2.0kb downstream 2.0kb downstream 2000 false chr3: 4976625-4978624 Medicago truncatula
Medtr3g017470 5.0kb upstream 5.0kb upstream 8597 true chr3: 4968028-4976624 Medicago truncatula
Medtr3g017470 5.0kb upstream 5.0kb upstream 5000 false chr3: 4968028-4973027 Medicago truncatula
Medtr3g017470 5.0kb downstream 5.0kb downstream 8597 true chr3: 4973028-4981624 Medicago truncatula
Medtr3g017470 5.0kb downstream 5.0kb downstream 5000 false chr3: 4976625-4981624 Medicago truncatula
Medtr3g017470 10.0kb upstream 10.0kb upstream 13597 true chr3: 4963028-4976624 Medicago truncatula
Medtr3g017470 10.0kb upstream 10.0kb upstream 10000 false chr3: 4963028-4973027 Medicago truncatula
Medtr3g017470 10.0kb downstream 10.0kb downstream 13597 true chr3: 4973028-4986624 Medicago truncatula
Medtr3g017470 10.0kb downstream 10.0kb downstream 10000 false chr3: 4976625-4986624 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307324 5265 Fabidae View MSA
124062185 5270 Rosid View MSA
123738152 5271 Pentapetalae View MSA
122785671 5272 Eudicot View MSA
122046213 5273 Angiosperm View MSA
121347995 5274 Embryophyte View MSA
123428800 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.718        
cufflinks 2.012        
cufflinks 2.351       High
cufflinks 1.483        
cufflinks 2.415       High
cufflinks 0.676       Low
cufflinks 1.332        
cufflinks 1.644        
cufflinks 1.638        

0 Strain