Gene : Medtr3g019820 M. truncatula Mt4.0v1
Defline:  (1 of 25) 2.5.1.112 - Adenylate dimethylallyltransferase (ADP/ATP-dependent) / Isopentenyltransferase Description:  cytokinin biosynthetic isopentenyltransferase
Genomic Order:  701 Name:  ? Medtr3g019820
Secondary Identifier:  ? PAC:31054346
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-2681 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g019820 0.5kb upstream 0.5kb upstream 1418 true chr3: 5641995-5643412 Medicago truncatula
Medtr3g019820 0.5kb upstream 0.5kb upstream 500 false chr3: 5641995-5642494 Medicago truncatula
Medtr3g019820 0.5kb downstream 0.5kb downstream 1418 true chr3: 5642495-5643912 Medicago truncatula
Medtr3g019820 0.5kb downstream 0.5kb downstream 500 false chr3: 5643413-5643912 Medicago truncatula
Medtr3g019820 1.0kb upstream 1.0kb upstream 1918 true chr3: 5641495-5643412 Medicago truncatula
Medtr3g019820 1.0kb upstream 1.0kb upstream 1000 false chr3: 5641495-5642494 Medicago truncatula
Medtr3g019820 1.0kb downstream 1.0kb downstream 1918 true chr3: 5642495-5644412 Medicago truncatula
Medtr3g019820 1.0kb downstream 1.0kb downstream 1000 false chr3: 5643413-5644412 Medicago truncatula
Medtr3g019820 2.0kb upstream 2.0kb upstream 2918 true chr3: 5640495-5643412 Medicago truncatula
Medtr3g019820 2.0kb upstream 2.0kb upstream 2000 false chr3: 5640495-5642494 Medicago truncatula
Medtr3g019820 2.0kb downstream 2.0kb downstream 2918 true chr3: 5642495-5645412 Medicago truncatula
Medtr3g019820 2.0kb downstream 2.0kb downstream 2000 false chr3: 5643413-5645412 Medicago truncatula
Medtr3g019820 5.0kb upstream 5.0kb upstream 5918 true chr3: 5637495-5643412 Medicago truncatula
Medtr3g019820 5.0kb upstream 5.0kb upstream 5000 false chr3: 5637495-5642494 Medicago truncatula
Medtr3g019820 5.0kb downstream 5.0kb downstream 5918 true chr3: 5642495-5648412 Medicago truncatula
Medtr3g019820 5.0kb downstream 5.0kb downstream 5000 false chr3: 5643413-5648412 Medicago truncatula
Medtr3g019820 10.0kb upstream 10.0kb upstream 10918 true chr3: 5632495-5643412 Medicago truncatula
Medtr3g019820 10.0kb upstream 10.0kb upstream 10000 false chr3: 5632495-5642494 Medicago truncatula
Medtr3g019820 10.0kb downstream 10.0kb downstream 10918 true chr3: 5642495-5653412 Medicago truncatula
Medtr3g019820 10.0kb downstream 10.0kb downstream 10000 false chr3: 5643413-5653412 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303429 5265 Fabidae View MSA
124050703 5270 Rosid View MSA
123755312 5271 Pentapetalae View MSA
122796048 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain