Gene : Medtr3g019330 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF14780 - Domain of unknown function (DUF4477) (DUF4477) Description:  hypothetical protein
Genomic Order:  681 Name:  ? Medtr3g019330
Secondary Identifier:  ? PAC:31058599
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g019330 0.5kb upstream 0.5kb upstream 7900 true chr3: 5402156-5410055 Medicago truncatula
Medtr3g019330 0.5kb upstream 0.5kb upstream 500 false chr3: 5409556-5410055 Medicago truncatula
Medtr3g019330 0.5kb downstream 0.5kb downstream 7900 true chr3: 5401656-5409555 Medicago truncatula
Medtr3g019330 0.5kb downstream 0.5kb downstream 500 false chr3: 5401656-5402155 Medicago truncatula
Medtr3g019330 1.0kb upstream 1.0kb upstream 8400 true chr3: 5402156-5410555 Medicago truncatula
Medtr3g019330 1.0kb upstream 1.0kb upstream 1000 false chr3: 5409556-5410555 Medicago truncatula
Medtr3g019330 1.0kb downstream 1.0kb downstream 8400 true chr3: 5401156-5409555 Medicago truncatula
Medtr3g019330 1.0kb downstream 1.0kb downstream 1000 false chr3: 5401156-5402155 Medicago truncatula
Medtr3g019330 2.0kb upstream 2.0kb upstream 9400 true chr3: 5402156-5411555 Medicago truncatula
Medtr3g019330 2.0kb upstream 2.0kb upstream 2000 false chr3: 5409556-5411555 Medicago truncatula
Medtr3g019330 2.0kb downstream 2.0kb downstream 9400 true chr3: 5400156-5409555 Medicago truncatula
Medtr3g019330 2.0kb downstream 2.0kb downstream 2000 false chr3: 5400156-5402155 Medicago truncatula
Medtr3g019330 5.0kb upstream 5.0kb upstream 12400 true chr3: 5402156-5414555 Medicago truncatula
Medtr3g019330 5.0kb upstream 5.0kb upstream 5000 false chr3: 5409556-5414555 Medicago truncatula
Medtr3g019330 5.0kb downstream 5.0kb downstream 12400 true chr3: 5397156-5409555 Medicago truncatula
Medtr3g019330 5.0kb downstream 5.0kb downstream 5000 false chr3: 5397156-5402155 Medicago truncatula
Medtr3g019330 10.0kb upstream 10.0kb upstream 17400 true chr3: 5402156-5419555 Medicago truncatula
Medtr3g019330 10.0kb upstream 10.0kb upstream 10000 false chr3: 5409556-5419555 Medicago truncatula
Medtr3g019330 10.0kb downstream 10.0kb downstream 17400 true chr3: 5392156-5409555 Medicago truncatula
Medtr3g019330 10.0kb downstream 10.0kb downstream 10000 false chr3: 5392156-5402155 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303642 5265 Fabidae View MSA
124069189 5270 Rosid View MSA
123741909 5271 Pentapetalae View MSA
122794147 5272 Eudicot View MSA
122045884 5273 Angiosperm View MSA
121347885 5274 Embryophyte View MSA
123380665 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.196       High
cufflinks 1.319        
cufflinks 1.842        
cufflinks 0.641        
cufflinks 1.635        
cufflinks 0.355       Low
cufflinks 1.35        
cufflinks 1.65        
cufflinks 0.73        

0 Strain