Gene : Medtr3g020680 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR15893 - RIBOSOMAL PROTEIN L27 Description:  50S ribosomal protein L27
Genomic Order:  733 Name:  ? Medtr3g020680
Secondary Identifier:  ? PAC:31054936
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g020680 0.5kb upstream 0.5kb upstream 4395 true chr3: 5996353-6000747 Medicago truncatula
Medtr3g020680 0.5kb upstream 0.5kb upstream 500 false chr3: 6000248-6000747 Medicago truncatula
Medtr3g020680 0.5kb downstream 0.5kb downstream 4395 true chr3: 5995853-6000247 Medicago truncatula
Medtr3g020680 0.5kb downstream 0.5kb downstream 500 false chr3: 5995853-5996352 Medicago truncatula
Medtr3g020680 1.0kb upstream 1.0kb upstream 4895 true chr3: 5996353-6001247 Medicago truncatula
Medtr3g020680 1.0kb upstream 1.0kb upstream 1000 false chr3: 6000248-6001247 Medicago truncatula
Medtr3g020680 1.0kb downstream 1.0kb downstream 4895 true chr3: 5995353-6000247 Medicago truncatula
Medtr3g020680 1.0kb downstream 1.0kb downstream 1000 false chr3: 5995353-5996352 Medicago truncatula
Medtr3g020680 2.0kb upstream 2.0kb upstream 5895 true chr3: 5996353-6002247 Medicago truncatula
Medtr3g020680 2.0kb upstream 2.0kb upstream 2000 false chr3: 6000248-6002247 Medicago truncatula
Medtr3g020680 2.0kb downstream 2.0kb downstream 5895 true chr3: 5994353-6000247 Medicago truncatula
Medtr3g020680 2.0kb downstream 2.0kb downstream 2000 false chr3: 5994353-5996352 Medicago truncatula
Medtr3g020680 5.0kb upstream 5.0kb upstream 8895 true chr3: 5996353-6005247 Medicago truncatula
Medtr3g020680 5.0kb upstream 5.0kb upstream 5000 false chr3: 6000248-6005247 Medicago truncatula
Medtr3g020680 5.0kb downstream 5.0kb downstream 8895 true chr3: 5991353-6000247 Medicago truncatula
Medtr3g020680 5.0kb downstream 5.0kb downstream 5000 false chr3: 5991353-5996352 Medicago truncatula
Medtr3g020680 10.0kb upstream 10.0kb upstream 13895 true chr3: 5996353-6010247 Medicago truncatula
Medtr3g020680 10.0kb upstream 10.0kb upstream 10000 false chr3: 6000248-6010247 Medicago truncatula
Medtr3g020680 10.0kb downstream 10.0kb downstream 13895 true chr3: 5986353-6000247 Medicago truncatula
Medtr3g020680 10.0kb downstream 10.0kb downstream 10000 false chr3: 5986353-5996352 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301316 5265 Fabidae View MSA
124063314 5270 Rosid View MSA
123738947 5271 Pentapetalae View MSA
122793743 5272 Eudicot View MSA
122042645 5273 Angiosperm View MSA
123429095 5275 Viridiplantae View MSA
121344050 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.997       Low
cufflinks 85.167     High High
cufflinks 75.641     High  
cufflinks 7.771        
cufflinks 81.04     High High
cufflinks 3.563        
cufflinks 2.437       Low
cufflinks 97.543     High High
cufflinks 3.995        

0 Strain