Gene : Medtr3g020660 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10351 - TRANSCRIPTION FACTOR BTF3 Description:  BTF3b-like transcription factor
Genomic Order:  731 Name:  ? Medtr3g020660
Secondary Identifier:  ? PAC:31056806
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g020660 0.5kb upstream 0.5kb upstream 3906 true chr3: 5985577-5989482 Medicago truncatula
Medtr3g020660 0.5kb upstream 0.5kb upstream 500 false chr3: 5988983-5989482 Medicago truncatula
Medtr3g020660 0.5kb downstream 0.5kb downstream 3906 true chr3: 5985077-5988982 Medicago truncatula
Medtr3g020660 0.5kb downstream 0.5kb downstream 500 false chr3: 5985077-5985576 Medicago truncatula
Medtr3g020660 1.0kb upstream 1.0kb upstream 4406 true chr3: 5985577-5989982 Medicago truncatula
Medtr3g020660 1.0kb upstream 1.0kb upstream 1000 false chr3: 5988983-5989982 Medicago truncatula
Medtr3g020660 1.0kb downstream 1.0kb downstream 4406 true chr3: 5984577-5988982 Medicago truncatula
Medtr3g020660 1.0kb downstream 1.0kb downstream 1000 false chr3: 5984577-5985576 Medicago truncatula
Medtr3g020660 2.0kb upstream 2.0kb upstream 5406 true chr3: 5985577-5990982 Medicago truncatula
Medtr3g020660 2.0kb upstream 2.0kb upstream 2000 false chr3: 5988983-5990982 Medicago truncatula
Medtr3g020660 2.0kb downstream 2.0kb downstream 5406 true chr3: 5983577-5988982 Medicago truncatula
Medtr3g020660 2.0kb downstream 2.0kb downstream 2000 false chr3: 5983577-5985576 Medicago truncatula
Medtr3g020660 5.0kb upstream 5.0kb upstream 8406 true chr3: 5985577-5993982 Medicago truncatula
Medtr3g020660 5.0kb upstream 5.0kb upstream 5000 false chr3: 5988983-5993982 Medicago truncatula
Medtr3g020660 5.0kb downstream 5.0kb downstream 8406 true chr3: 5980577-5988982 Medicago truncatula
Medtr3g020660 5.0kb downstream 5.0kb downstream 5000 false chr3: 5980577-5985576 Medicago truncatula
Medtr3g020660 10.0kb upstream 10.0kb upstream 13406 true chr3: 5985577-5998982 Medicago truncatula
Medtr3g020660 10.0kb upstream 10.0kb upstream 10000 false chr3: 5988983-5998982 Medicago truncatula
Medtr3g020660 10.0kb downstream 10.0kb downstream 13406 true chr3: 5975577-5988982 Medicago truncatula
Medtr3g020660 10.0kb downstream 10.0kb downstream 10000 false chr3: 5975577-5985576 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312146 5265 Fabidae View MSA
124060990 5270 Rosid View MSA
123752380 5271 Pentapetalae View MSA
122793181 5272 Eudicot View MSA
122044361 5273 Angiosperm View MSA
121348079 5274 Embryophyte View MSA
123423973 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.581       Low
cufflinks 17.961     High  
cufflinks 15.498     High  
cufflinks 21.818     High  
cufflinks 28.123     High High
cufflinks 8.324       Low
cufflinks 18.419     High  
cufflinks 18.955     High  
cufflinks 22.922     High  

0 Strain