Gene : Medtr3g023160 M. truncatula Mt4.0v1
Description:  high chlorophyll fluorescence 153 protein Genomic Order:  837
Name:  ? Medtr3g023160 Secondary Identifier:  ? PAC:31061413
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g023160 0.5kb upstream 0.5kb upstream 2955 true chr3: 6995504-6998458 Medicago truncatula
Medtr3g023160 0.5kb upstream 0.5kb upstream 500 false chr3: 6995504-6996003 Medicago truncatula
Medtr3g023160 0.5kb downstream 0.5kb downstream 2955 true chr3: 6996004-6998958 Medicago truncatula
Medtr3g023160 0.5kb downstream 0.5kb downstream 500 false chr3: 6998459-6998958 Medicago truncatula
Medtr3g023160 1.0kb upstream 1.0kb upstream 3455 true chr3: 6995004-6998458 Medicago truncatula
Medtr3g023160 1.0kb upstream 1.0kb upstream 1000 false chr3: 6995004-6996003 Medicago truncatula
Medtr3g023160 1.0kb downstream 1.0kb downstream 3455 true chr3: 6996004-6999458 Medicago truncatula
Medtr3g023160 1.0kb downstream 1.0kb downstream 1000 false chr3: 6998459-6999458 Medicago truncatula
Medtr3g023160 2.0kb upstream 2.0kb upstream 4455 true chr3: 6994004-6998458 Medicago truncatula
Medtr3g023160 2.0kb upstream 2.0kb upstream 2000 false chr3: 6994004-6996003 Medicago truncatula
Medtr3g023160 2.0kb downstream 2.0kb downstream 4455 true chr3: 6996004-7000458 Medicago truncatula
Medtr3g023160 2.0kb downstream 2.0kb downstream 2000 false chr3: 6998459-7000458 Medicago truncatula
Medtr3g023160 5.0kb upstream 5.0kb upstream 7455 true chr3: 6991004-6998458 Medicago truncatula
Medtr3g023160 5.0kb upstream 5.0kb upstream 5000 false chr3: 6991004-6996003 Medicago truncatula
Medtr3g023160 5.0kb downstream 5.0kb downstream 7455 true chr3: 6996004-7003458 Medicago truncatula
Medtr3g023160 5.0kb downstream 5.0kb downstream 5000 false chr3: 6998459-7003458 Medicago truncatula
Medtr3g023160 10.0kb upstream 10.0kb upstream 12455 true chr3: 6986004-6998458 Medicago truncatula
Medtr3g023160 10.0kb upstream 10.0kb upstream 10000 false chr3: 6986004-6996003 Medicago truncatula
Medtr3g023160 10.0kb downstream 10.0kb downstream 12455 true chr3: 6996004-7008458 Medicago truncatula
Medtr3g023160 10.0kb downstream 10.0kb downstream 10000 false chr3: 6998459-7008458 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312280 5265 Fabidae View MSA
124068196 5270 Rosid View MSA
123749169 5271 Pentapetalae View MSA
122787742 5272 Eudicot View MSA
122044964 5273 Angiosperm View MSA
121310373 5274 Embryophyte View MSA
123347874 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.496        
cufflinks 2.228       High
cufflinks 1.629        
cufflinks 0.206       Low
cufflinks 3.37       High
cufflinks 0.373        
cufflinks 0.261       Low
cufflinks 1.924        
cufflinks 0.446        

0 Strain