Gene : Medtr3g026400 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10353//PTHR10353:SF44 - GLYCOSYL HYDROLASE Description:  glycoside hydrolase family 1 protein
Genomic Order:  970 Name:  ? Medtr3g026400
Secondary Identifier:  ? PAC:31060448
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7093 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g026400 0.5kb upstream 0.5kb upstream 6726 true chr3: 8136722-8143447 Medicago truncatula
Medtr3g026400 0.5kb upstream 0.5kb upstream 500 false chr3: 8136722-8137221 Medicago truncatula
Medtr3g026400 0.5kb downstream 0.5kb downstream 6726 true chr3: 8137222-8143947 Medicago truncatula
Medtr3g026400 0.5kb downstream 0.5kb downstream 500 false chr3: 8143448-8143947 Medicago truncatula
Medtr3g026400 1.0kb upstream 1.0kb upstream 7226 true chr3: 8136222-8143447 Medicago truncatula
Medtr3g026400 1.0kb upstream 1.0kb upstream 1000 false chr3: 8136222-8137221 Medicago truncatula
Medtr3g026400 1.0kb downstream 1.0kb downstream 7226 true chr3: 8137222-8144447 Medicago truncatula
Medtr3g026400 1.0kb downstream 1.0kb downstream 1000 false chr3: 8143448-8144447 Medicago truncatula
Medtr3g026400 2.0kb upstream 2.0kb upstream 8226 true chr3: 8135222-8143447 Medicago truncatula
Medtr3g026400 2.0kb upstream 2.0kb upstream 2000 false chr3: 8135222-8137221 Medicago truncatula
Medtr3g026400 2.0kb downstream 2.0kb downstream 8226 true chr3: 8137222-8145447 Medicago truncatula
Medtr3g026400 2.0kb downstream 2.0kb downstream 2000 false chr3: 8143448-8145447 Medicago truncatula
Medtr3g026400 5.0kb upstream 5.0kb upstream 11226 true chr3: 8132222-8143447 Medicago truncatula
Medtr3g026400 5.0kb upstream 5.0kb upstream 5000 false chr3: 8132222-8137221 Medicago truncatula
Medtr3g026400 5.0kb downstream 5.0kb downstream 11226 true chr3: 8137222-8148447 Medicago truncatula
Medtr3g026400 5.0kb downstream 5.0kb downstream 5000 false chr3: 8143448-8148447 Medicago truncatula
Medtr3g026400 10.0kb upstream 10.0kb upstream 16226 true chr3: 8127222-8143447 Medicago truncatula
Medtr3g026400 10.0kb upstream 10.0kb upstream 10000 false chr3: 8127222-8137221 Medicago truncatula
Medtr3g026400 10.0kb downstream 10.0kb downstream 16226 true chr3: 8137222-8153447 Medicago truncatula
Medtr3g026400 10.0kb downstream 10.0kb downstream 10000 false chr3: 8143448-8153447 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314908 5265 Fabidae View MSA
124071856 5270 Rosid View MSA
123753517 5271 Pentapetalae View MSA
122797747 5272 Eudicot View MSA
122051599 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.001     Low Low
cufflinks 5.799        
cufflinks 6.406        
cufflinks 0.003     Low Low
cufflinks 8.767       High
cufflinks 0.015     Low  
cufflinks 0.037     Low  
cufflinks 8.624       High
cufflinks 0.012     Low  

0 Strain