Gene : Medtr3g025970 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31413:SF4 - NINJA-FAMILY PROTEIN AFP1-RELATED Description:  ninja-family protein AFP1
Genomic Order:  943 Name:  ? Medtr3g025970
Secondary Identifier:  ? PAC:31058176
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g025970 0.5kb upstream 0.5kb upstream 3408 true chr3: 7928987-7932394 Medicago truncatula
Medtr3g025970 0.5kb upstream 0.5kb upstream 500 false chr3: 7931895-7932394 Medicago truncatula
Medtr3g025970 0.5kb downstream 0.5kb downstream 3408 true chr3: 7928487-7931894 Medicago truncatula
Medtr3g025970 0.5kb downstream 0.5kb downstream 500 false chr3: 7928487-7928986 Medicago truncatula
Medtr3g025970 1.0kb upstream 1.0kb upstream 3908 true chr3: 7928987-7932894 Medicago truncatula
Medtr3g025970 1.0kb upstream 1.0kb upstream 1000 false chr3: 7931895-7932894 Medicago truncatula
Medtr3g025970 1.0kb downstream 1.0kb downstream 3908 true chr3: 7927987-7931894 Medicago truncatula
Medtr3g025970 1.0kb downstream 1.0kb downstream 1000 false chr3: 7927987-7928986 Medicago truncatula
Medtr3g025970 2.0kb upstream 2.0kb upstream 4908 true chr3: 7928987-7933894 Medicago truncatula
Medtr3g025970 2.0kb upstream 2.0kb upstream 2000 false chr3: 7931895-7933894 Medicago truncatula
Medtr3g025970 2.0kb downstream 2.0kb downstream 4908 true chr3: 7926987-7931894 Medicago truncatula
Medtr3g025970 2.0kb downstream 2.0kb downstream 2000 false chr3: 7926987-7928986 Medicago truncatula
Medtr3g025970 5.0kb upstream 5.0kb upstream 7908 true chr3: 7928987-7936894 Medicago truncatula
Medtr3g025970 5.0kb upstream 5.0kb upstream 5000 false chr3: 7931895-7936894 Medicago truncatula
Medtr3g025970 5.0kb downstream 5.0kb downstream 7908 true chr3: 7923987-7931894 Medicago truncatula
Medtr3g025970 5.0kb downstream 5.0kb downstream 5000 false chr3: 7923987-7928986 Medicago truncatula
Medtr3g025970 10.0kb upstream 10.0kb upstream 12908 true chr3: 7928987-7941894 Medicago truncatula
Medtr3g025970 10.0kb upstream 10.0kb upstream 10000 false chr3: 7931895-7941894 Medicago truncatula
Medtr3g025970 10.0kb downstream 10.0kb downstream 12908 true chr3: 7918987-7931894 Medicago truncatula
Medtr3g025970 10.0kb downstream 10.0kb downstream 10000 false chr3: 7918987-7928986 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314382 5265 Fabidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low Low
cufflinks 0.093        
cufflinks 0.147        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.14        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low Low
cufflinks 0.205        
cufflinks 0.108        

0 Strain