Gene : Medtr3g025550 M. truncatula Mt4.0v1
Defline:  (1 of 53) PTHR22763 - RING ZINC FINGER PROTEIN Description:  anaphase-promoting complex subunit 11 RING-H2 finger protein
Genomic Order:  930 Name:  ? Medtr3g025550
Secondary Identifier:  ? PAC:31058967
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7511 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g025550 0.5kb upstream 0.5kb upstream 935 true chr3: 7818959-7819893 Medicago truncatula
Medtr3g025550 0.5kb upstream 0.5kb upstream 500 false chr3: 7818959-7819458 Medicago truncatula
Medtr3g025550 0.5kb downstream 0.5kb downstream 935 true chr3: 7819459-7820393 Medicago truncatula
Medtr3g025550 0.5kb downstream 0.5kb downstream 500 false chr3: 7819894-7820393 Medicago truncatula
Medtr3g025550 1.0kb upstream 1.0kb upstream 1435 true chr3: 7818459-7819893 Medicago truncatula
Medtr3g025550 1.0kb upstream 1.0kb upstream 1000 false chr3: 7818459-7819458 Medicago truncatula
Medtr3g025550 1.0kb downstream 1.0kb downstream 1435 true chr3: 7819459-7820893 Medicago truncatula
Medtr3g025550 1.0kb downstream 1.0kb downstream 1000 false chr3: 7819894-7820893 Medicago truncatula
Medtr3g025550 2.0kb upstream 2.0kb upstream 2435 true chr3: 7817459-7819893 Medicago truncatula
Medtr3g025550 2.0kb upstream 2.0kb upstream 2000 false chr3: 7817459-7819458 Medicago truncatula
Medtr3g025550 2.0kb downstream 2.0kb downstream 2435 true chr3: 7819459-7821893 Medicago truncatula
Medtr3g025550 2.0kb downstream 2.0kb downstream 2000 false chr3: 7819894-7821893 Medicago truncatula
Medtr3g025550 5.0kb upstream 5.0kb upstream 5435 true chr3: 7814459-7819893 Medicago truncatula
Medtr3g025550 5.0kb upstream 5.0kb upstream 5000 false chr3: 7814459-7819458 Medicago truncatula
Medtr3g025550 5.0kb downstream 5.0kb downstream 5435 true chr3: 7819459-7824893 Medicago truncatula
Medtr3g025550 5.0kb downstream 5.0kb downstream 5000 false chr3: 7819894-7824893 Medicago truncatula
Medtr3g025550 10.0kb upstream 10.0kb upstream 10435 true chr3: 7809459-7819893 Medicago truncatula
Medtr3g025550 10.0kb upstream 10.0kb upstream 10000 false chr3: 7809459-7819458 Medicago truncatula
Medtr3g025550 10.0kb downstream 10.0kb downstream 10435 true chr3: 7819459-7829893 Medicago truncatula
Medtr3g025550 10.0kb downstream 10.0kb downstream 10000 false chr3: 7819894-7829893 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122260514 5265 Fabidae Singleton cluster - no MSA
124074559 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain