Gene : Medtr3g027870 M. truncatula Mt4.0v1
Defline:  (1 of 1) 2.1.1.207 - tRNA (cytidine(34)-2'-O)-methyltransferase / tRNA methyltransferase L Description:  tRNA/rRNA methyltransferase SpoU family protein
Genomic Order:  1039 Name:  ? Medtr3g027870
Secondary Identifier:  ? PAC:31056614
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g027870 0.5kb upstream 0.5kb upstream 5827 true chr3: 8786048-8791874 Medicago truncatula
Medtr3g027870 0.5kb upstream 0.5kb upstream 500 false chr3: 8786048-8786547 Medicago truncatula
Medtr3g027870 0.5kb downstream 0.5kb downstream 5827 true chr3: 8786548-8792374 Medicago truncatula
Medtr3g027870 0.5kb downstream 0.5kb downstream 500 false chr3: 8791875-8792374 Medicago truncatula
Medtr3g027870 1.0kb upstream 1.0kb upstream 6327 true chr3: 8785548-8791874 Medicago truncatula
Medtr3g027870 1.0kb upstream 1.0kb upstream 1000 false chr3: 8785548-8786547 Medicago truncatula
Medtr3g027870 1.0kb downstream 1.0kb downstream 6327 true chr3: 8786548-8792874 Medicago truncatula
Medtr3g027870 1.0kb downstream 1.0kb downstream 1000 false chr3: 8791875-8792874 Medicago truncatula
Medtr3g027870 2.0kb upstream 2.0kb upstream 7327 true chr3: 8784548-8791874 Medicago truncatula
Medtr3g027870 2.0kb upstream 2.0kb upstream 2000 false chr3: 8784548-8786547 Medicago truncatula
Medtr3g027870 2.0kb downstream 2.0kb downstream 7327 true chr3: 8786548-8793874 Medicago truncatula
Medtr3g027870 2.0kb downstream 2.0kb downstream 2000 false chr3: 8791875-8793874 Medicago truncatula
Medtr3g027870 5.0kb upstream 5.0kb upstream 10327 true chr3: 8781548-8791874 Medicago truncatula
Medtr3g027870 5.0kb upstream 5.0kb upstream 5000 false chr3: 8781548-8786547 Medicago truncatula
Medtr3g027870 5.0kb downstream 5.0kb downstream 10327 true chr3: 8786548-8796874 Medicago truncatula
Medtr3g027870 5.0kb downstream 5.0kb downstream 5000 false chr3: 8791875-8796874 Medicago truncatula
Medtr3g027870 10.0kb upstream 10.0kb upstream 15327 true chr3: 8776548-8791874 Medicago truncatula
Medtr3g027870 10.0kb upstream 10.0kb upstream 10000 false chr3: 8776548-8786547 Medicago truncatula
Medtr3g027870 10.0kb downstream 10.0kb downstream 15327 true chr3: 8786548-8801874 Medicago truncatula
Medtr3g027870 10.0kb downstream 10.0kb downstream 10000 false chr3: 8791875-8801874 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308339 5265 Fabidae View MSA
124066668 5270 Rosid View MSA
123737524 5271 Pentapetalae View MSA
122792553 5272 Eudicot View MSA
122045816 5273 Angiosperm View MSA
121345539 5274 Embryophyte View MSA
123426334 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.095        
cufflinks 0.446        
cufflinks 0.467        
cufflinks 0.115        
cufflinks 0.951       High
cufflinks 0.045     Low Low
cufflinks 0.125        
cufflinks 0.45        
cufflinks 0.171        

0 Strain