Gene : Medtr3g027580 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR24078//PTHR24078:SF289 - DNAJ HOMOLOG SUBFAMILY C MEMBER Description:  DnaJ-class molecular chaperone
Genomic Order:  1028 Name:  ? Medtr3g027580
Secondary Identifier:  ? PAC:31059187
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g027580 0.5kb upstream 0.5kb upstream 10510 true chr3: 8635896-8646405 Medicago truncatula
Medtr3g027580 0.5kb upstream 0.5kb upstream 500 false chr3: 8635896-8636395 Medicago truncatula
Medtr3g027580 0.5kb downstream 0.5kb downstream 10510 true chr3: 8636396-8646905 Medicago truncatula
Medtr3g027580 0.5kb downstream 0.5kb downstream 500 false chr3: 8646406-8646905 Medicago truncatula
Medtr3g027580 1.0kb upstream 1.0kb upstream 11010 true chr3: 8635396-8646405 Medicago truncatula
Medtr3g027580 1.0kb upstream 1.0kb upstream 1000 false chr3: 8635396-8636395 Medicago truncatula
Medtr3g027580 1.0kb downstream 1.0kb downstream 11010 true chr3: 8636396-8647405 Medicago truncatula
Medtr3g027580 1.0kb downstream 1.0kb downstream 1000 false chr3: 8646406-8647405 Medicago truncatula
Medtr3g027580 2.0kb upstream 2.0kb upstream 12010 true chr3: 8634396-8646405 Medicago truncatula
Medtr3g027580 2.0kb upstream 2.0kb upstream 2000 false chr3: 8634396-8636395 Medicago truncatula
Medtr3g027580 2.0kb downstream 2.0kb downstream 12010 true chr3: 8636396-8648405 Medicago truncatula
Medtr3g027580 2.0kb downstream 2.0kb downstream 2000 false chr3: 8646406-8648405 Medicago truncatula
Medtr3g027580 5.0kb upstream 5.0kb upstream 15010 true chr3: 8631396-8646405 Medicago truncatula
Medtr3g027580 5.0kb upstream 5.0kb upstream 5000 false chr3: 8631396-8636395 Medicago truncatula
Medtr3g027580 5.0kb downstream 5.0kb downstream 15010 true chr3: 8636396-8651405 Medicago truncatula
Medtr3g027580 5.0kb downstream 5.0kb downstream 5000 false chr3: 8646406-8651405 Medicago truncatula
Medtr3g027580 10.0kb upstream 10.0kb upstream 20010 true chr3: 8626396-8646405 Medicago truncatula
Medtr3g027580 10.0kb upstream 10.0kb upstream 10000 false chr3: 8626396-8636395 Medicago truncatula
Medtr3g027580 10.0kb downstream 10.0kb downstream 20010 true chr3: 8636396-8656405 Medicago truncatula
Medtr3g027580 10.0kb downstream 10.0kb downstream 10000 false chr3: 8646406-8656405 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309798 5265 Fabidae View MSA
124068999 5270 Rosid View MSA
123738793 5271 Pentapetalae View MSA
122792867 5272 Eudicot View MSA
122041939 5273 Angiosperm View MSA
121345452 5274 Embryophyte View MSA
123380218 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.459        
cufflinks 1.718        
cufflinks 2.191        
cufflinks 0.469        
cufflinks 2.823       High
cufflinks 0.173       Low
cufflinks 0.829        
cufflinks 1.938        
cufflinks 0.973        

0 Strain