Gene : Medtr3g027610 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12601:SF6 - CLUSTERED MITOCHONDRIA PROTEIN HOMOLOG Description:  eukaryotic translation initiation factor 3 subunit, putative
Genomic Order:  1030 Name:  ? Medtr3g027610
Secondary Identifier:  ? PAC:31055499
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g027610 0.5kb upstream 0.5kb upstream 15307 true chr3: 8657399-8672705 Medicago truncatula
Medtr3g027610 0.5kb upstream 0.5kb upstream 500 false chr3: 8657399-8657898 Medicago truncatula
Medtr3g027610 0.5kb downstream 0.5kb downstream 15307 true chr3: 8657899-8673205 Medicago truncatula
Medtr3g027610 0.5kb downstream 0.5kb downstream 500 false chr3: 8672706-8673205 Medicago truncatula
Medtr3g027610 1.0kb upstream 1.0kb upstream 15807 true chr3: 8656899-8672705 Medicago truncatula
Medtr3g027610 1.0kb upstream 1.0kb upstream 1000 false chr3: 8656899-8657898 Medicago truncatula
Medtr3g027610 1.0kb downstream 1.0kb downstream 15807 true chr3: 8657899-8673705 Medicago truncatula
Medtr3g027610 1.0kb downstream 1.0kb downstream 1000 false chr3: 8672706-8673705 Medicago truncatula
Medtr3g027610 2.0kb upstream 2.0kb upstream 16807 true chr3: 8655899-8672705 Medicago truncatula
Medtr3g027610 2.0kb upstream 2.0kb upstream 2000 false chr3: 8655899-8657898 Medicago truncatula
Medtr3g027610 2.0kb downstream 2.0kb downstream 16807 true chr3: 8657899-8674705 Medicago truncatula
Medtr3g027610 2.0kb downstream 2.0kb downstream 2000 false chr3: 8672706-8674705 Medicago truncatula
Medtr3g027610 5.0kb upstream 5.0kb upstream 19807 true chr3: 8652899-8672705 Medicago truncatula
Medtr3g027610 5.0kb upstream 5.0kb upstream 5000 false chr3: 8652899-8657898 Medicago truncatula
Medtr3g027610 5.0kb downstream 5.0kb downstream 19807 true chr3: 8657899-8677705 Medicago truncatula
Medtr3g027610 5.0kb downstream 5.0kb downstream 5000 false chr3: 8672706-8677705 Medicago truncatula
Medtr3g027610 10.0kb upstream 10.0kb upstream 24807 true chr3: 8647899-8672705 Medicago truncatula
Medtr3g027610 10.0kb upstream 10.0kb upstream 10000 false chr3: 8647899-8657898 Medicago truncatula
Medtr3g027610 10.0kb downstream 10.0kb downstream 24807 true chr3: 8657899-8682705 Medicago truncatula
Medtr3g027610 10.0kb downstream 10.0kb downstream 10000 false chr3: 8672706-8682705 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307216 5265 Fabidae View MSA
124065993 5270 Rosid View MSA
123739078 5271 Pentapetalae View MSA
122787261 5272 Eudicot View MSA
122046503 5273 Angiosperm View MSA
121349433 5274 Embryophyte View MSA
123381307 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.016        
cufflinks 5.778        
cufflinks 5.796        
cufflinks 2.912        
cufflinks 10.844     High High
cufflinks 1.031       Low
cufflinks 4.469        
cufflinks 6.457        
cufflinks 4.678        

0 Strain