Gene : Medtr3g027150 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10024:SF256 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Description:  calcium-dependent lipid-binding (CaLB domain) family protein
Genomic Order:  1006 Name:  ? Medtr3g027150
Secondary Identifier:  ? PAC:31060956
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g027150 0.5kb upstream 0.5kb upstream 3726 true chr3: 8415069-8418794 Medicago truncatula
Medtr3g027150 0.5kb upstream 0.5kb upstream 500 false chr3: 8418295-8418794 Medicago truncatula
Medtr3g027150 0.5kb downstream 0.5kb downstream 3726 true chr3: 8414569-8418294 Medicago truncatula
Medtr3g027150 0.5kb downstream 0.5kb downstream 500 false chr3: 8414569-8415068 Medicago truncatula
Medtr3g027150 1.0kb upstream 1.0kb upstream 4226 true chr3: 8415069-8419294 Medicago truncatula
Medtr3g027150 1.0kb upstream 1.0kb upstream 1000 false chr3: 8418295-8419294 Medicago truncatula
Medtr3g027150 1.0kb downstream 1.0kb downstream 4226 true chr3: 8414069-8418294 Medicago truncatula
Medtr3g027150 1.0kb downstream 1.0kb downstream 1000 false chr3: 8414069-8415068 Medicago truncatula
Medtr3g027150 2.0kb upstream 2.0kb upstream 5226 true chr3: 8415069-8420294 Medicago truncatula
Medtr3g027150 2.0kb upstream 2.0kb upstream 2000 false chr3: 8418295-8420294 Medicago truncatula
Medtr3g027150 2.0kb downstream 2.0kb downstream 5226 true chr3: 8413069-8418294 Medicago truncatula
Medtr3g027150 2.0kb downstream 2.0kb downstream 2000 false chr3: 8413069-8415068 Medicago truncatula
Medtr3g027150 5.0kb upstream 5.0kb upstream 8226 true chr3: 8415069-8423294 Medicago truncatula
Medtr3g027150 5.0kb upstream 5.0kb upstream 5000 false chr3: 8418295-8423294 Medicago truncatula
Medtr3g027150 5.0kb downstream 5.0kb downstream 8226 true chr3: 8410069-8418294 Medicago truncatula
Medtr3g027150 5.0kb downstream 5.0kb downstream 5000 false chr3: 8410069-8415068 Medicago truncatula
Medtr3g027150 10.0kb upstream 10.0kb upstream 13226 true chr3: 8415069-8428294 Medicago truncatula
Medtr3g027150 10.0kb upstream 10.0kb upstream 10000 false chr3: 8418295-8428294 Medicago truncatula
Medtr3g027150 10.0kb downstream 10.0kb downstream 13226 true chr3: 8405069-8418294 Medicago truncatula
Medtr3g027150 10.0kb downstream 10.0kb downstream 10000 false chr3: 8405069-8415068 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311480 5265 Fabidae View MSA
124069332 5270 Rosid View MSA
123741936 5271 Pentapetalae View MSA
122796289 5272 Eudicot View MSA
122048920 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.142       Low
cufflinks 0.431        
cufflinks 0.354        
cufflinks 0.424        
cufflinks 0.398        
cufflinks 0.41        
cufflinks 0.653       High
cufflinks 0.514        
cufflinks 0.491        

0 Strain