Gene : Medtr3g026690 M. truncatula Mt4.0v1
Defline:  (1 of 47) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  976 Name:  ? Medtr3g026690
Secondary Identifier:  ? PAC:31054225
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g026690 0.5kb upstream 0.5kb upstream 4649 true chr3: 8190900-8195548 Medicago truncatula
Medtr3g026690 0.5kb upstream 0.5kb upstream 500 false chr3: 8195049-8195548 Medicago truncatula
Medtr3g026690 0.5kb downstream 0.5kb downstream 4649 true chr3: 8190400-8195048 Medicago truncatula
Medtr3g026690 0.5kb downstream 0.5kb downstream 500 false chr3: 8190400-8190899 Medicago truncatula
Medtr3g026690 1.0kb upstream 1.0kb upstream 5149 true chr3: 8190900-8196048 Medicago truncatula
Medtr3g026690 1.0kb upstream 1.0kb upstream 1000 false chr3: 8195049-8196048 Medicago truncatula
Medtr3g026690 1.0kb downstream 1.0kb downstream 5149 true chr3: 8189900-8195048 Medicago truncatula
Medtr3g026690 1.0kb downstream 1.0kb downstream 1000 false chr3: 8189900-8190899 Medicago truncatula
Medtr3g026690 2.0kb upstream 2.0kb upstream 6149 true chr3: 8190900-8197048 Medicago truncatula
Medtr3g026690 2.0kb upstream 2.0kb upstream 2000 false chr3: 8195049-8197048 Medicago truncatula
Medtr3g026690 2.0kb downstream 2.0kb downstream 6149 true chr3: 8188900-8195048 Medicago truncatula
Medtr3g026690 2.0kb downstream 2.0kb downstream 2000 false chr3: 8188900-8190899 Medicago truncatula
Medtr3g026690 5.0kb upstream 5.0kb upstream 9149 true chr3: 8190900-8200048 Medicago truncatula
Medtr3g026690 5.0kb upstream 5.0kb upstream 5000 false chr3: 8195049-8200048 Medicago truncatula
Medtr3g026690 5.0kb downstream 5.0kb downstream 9149 true chr3: 8185900-8195048 Medicago truncatula
Medtr3g026690 5.0kb downstream 5.0kb downstream 5000 false chr3: 8185900-8190899 Medicago truncatula
Medtr3g026690 10.0kb upstream 10.0kb upstream 14149 true chr3: 8190900-8205048 Medicago truncatula
Medtr3g026690 10.0kb upstream 10.0kb upstream 10000 false chr3: 8195049-8205048 Medicago truncatula
Medtr3g026690 10.0kb downstream 10.0kb downstream 14149 true chr3: 8180900-8195048 Medicago truncatula
Medtr3g026690 10.0kb downstream 10.0kb downstream 10000 false chr3: 8180900-8190899 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311756 5265 Fabidae View MSA
124050226 5270 Rosid View MSA
123741335 5271 Pentapetalae View MSA
122792200 5272 Eudicot View MSA
122050004 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.42        
cufflinks 0.244        
cufflinks 0.352        
cufflinks 0.057     Low Low
cufflinks 0.466       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.161        
cufflinks 0.294        
cufflinks 0.074     Low Low

0 Strain