Gene : Medtr3g007930 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31902:SF1 - ACTIN PATCHES DISTAL PROTEIN 1 Description:  sucrase/ferredoxin family protein
Genomic Order:  169 Name:  ? Medtr3g007930
Secondary Identifier:  ? PAC:31053994
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g007930 0.5kb upstream 0.5kb upstream 5250 true chr3: 1246764-1252013 Medicago truncatula
Medtr3g007930 0.5kb upstream 0.5kb upstream 500 false chr3: 1246764-1247263 Medicago truncatula
Medtr3g007930 0.5kb downstream 0.5kb downstream 5250 true chr3: 1247264-1252513 Medicago truncatula
Medtr3g007930 0.5kb downstream 0.5kb downstream 500 false chr3: 1252014-1252513 Medicago truncatula
Medtr3g007930 1.0kb upstream 1.0kb upstream 5750 true chr3: 1246264-1252013 Medicago truncatula
Medtr3g007930 1.0kb upstream 1.0kb upstream 1000 false chr3: 1246264-1247263 Medicago truncatula
Medtr3g007930 1.0kb downstream 1.0kb downstream 5750 true chr3: 1247264-1253013 Medicago truncatula
Medtr3g007930 1.0kb downstream 1.0kb downstream 1000 false chr3: 1252014-1253013 Medicago truncatula
Medtr3g007930 2.0kb upstream 2.0kb upstream 6750 true chr3: 1245264-1252013 Medicago truncatula
Medtr3g007930 2.0kb upstream 2.0kb upstream 2000 false chr3: 1245264-1247263 Medicago truncatula
Medtr3g007930 2.0kb downstream 2.0kb downstream 6750 true chr3: 1247264-1254013 Medicago truncatula
Medtr3g007930 2.0kb downstream 2.0kb downstream 2000 false chr3: 1252014-1254013 Medicago truncatula
Medtr3g007930 5.0kb upstream 5.0kb upstream 9750 true chr3: 1242264-1252013 Medicago truncatula
Medtr3g007930 5.0kb upstream 5.0kb upstream 5000 false chr3: 1242264-1247263 Medicago truncatula
Medtr3g007930 5.0kb downstream 5.0kb downstream 9750 true chr3: 1247264-1257013 Medicago truncatula
Medtr3g007930 5.0kb downstream 5.0kb downstream 5000 false chr3: 1252014-1257013 Medicago truncatula
Medtr3g007930 10.0kb upstream 10.0kb upstream 14750 true chr3: 1237264-1252013 Medicago truncatula
Medtr3g007930 10.0kb upstream 10.0kb upstream 10000 false chr3: 1237264-1247263 Medicago truncatula
Medtr3g007930 10.0kb downstream 10.0kb downstream 14750 true chr3: 1247264-1262013 Medicago truncatula
Medtr3g007930 10.0kb downstream 10.0kb downstream 10000 false chr3: 1252014-1262013 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308264 5265 Fabidae View MSA
124065640 5270 Rosid View MSA
123740053 5271 Pentapetalae View MSA
122787822 5272 Eudicot View MSA
122051641 5273 Angiosperm View MSA
121346149 5274 Embryophyte View MSA
123427661 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.139       High
cufflinks 0.063     Low  
cufflinks 0.095        
cufflinks 0.041     Low  
cufflinks 0.106        
cufflinks 0.018     Low Low
cufflinks 0.075        
cufflinks 0.06     Low  
cufflinks 0.12        

0 Strain