Gene : Medtr3g007660 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11527//PTHR11527:SF131 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY Description:  hsp20/alpha crystallin family protein
Genomic Order:  148 Name:  ? Medtr3g007660
Secondary Identifier:  ? PAC:31056354
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g007660 0.5kb upstream 0.5kb upstream 2914 true chr3: 1109865-1112778 Medicago truncatula
Medtr3g007660 0.5kb upstream 0.5kb upstream 500 false chr3: 1112279-1112778 Medicago truncatula
Medtr3g007660 0.5kb downstream 0.5kb downstream 2914 true chr3: 1109365-1112278 Medicago truncatula
Medtr3g007660 0.5kb downstream 0.5kb downstream 500 false chr3: 1109365-1109864 Medicago truncatula
Medtr3g007660 1.0kb upstream 1.0kb upstream 3414 true chr3: 1109865-1113278 Medicago truncatula
Medtr3g007660 1.0kb upstream 1.0kb upstream 1000 false chr3: 1112279-1113278 Medicago truncatula
Medtr3g007660 1.0kb downstream 1.0kb downstream 3414 true chr3: 1108865-1112278 Medicago truncatula
Medtr3g007660 1.0kb downstream 1.0kb downstream 1000 false chr3: 1108865-1109864 Medicago truncatula
Medtr3g007660 2.0kb upstream 2.0kb upstream 4414 true chr3: 1109865-1114278 Medicago truncatula
Medtr3g007660 2.0kb upstream 2.0kb upstream 2000 false chr3: 1112279-1114278 Medicago truncatula
Medtr3g007660 2.0kb downstream 2.0kb downstream 4414 true chr3: 1107865-1112278 Medicago truncatula
Medtr3g007660 2.0kb downstream 2.0kb downstream 2000 false chr3: 1107865-1109864 Medicago truncatula
Medtr3g007660 5.0kb upstream 5.0kb upstream 7414 true chr3: 1109865-1117278 Medicago truncatula
Medtr3g007660 5.0kb upstream 5.0kb upstream 5000 false chr3: 1112279-1117278 Medicago truncatula
Medtr3g007660 5.0kb downstream 5.0kb downstream 7414 true chr3: 1104865-1112278 Medicago truncatula
Medtr3g007660 5.0kb downstream 5.0kb downstream 5000 false chr3: 1104865-1109864 Medicago truncatula
Medtr3g007660 10.0kb upstream 10.0kb upstream 12414 true chr3: 1109865-1122278 Medicago truncatula
Medtr3g007660 10.0kb upstream 10.0kb upstream 10000 false chr3: 1112279-1122278 Medicago truncatula
Medtr3g007660 10.0kb downstream 10.0kb downstream 12414 true chr3: 1099865-1112278 Medicago truncatula
Medtr3g007660 10.0kb downstream 10.0kb downstream 10000 false chr3: 1099865-1109864 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312292 5265 Fabidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.057     Low Low
cufflinks 1.245        
cufflinks 1.098        
cufflinks 0.798        
cufflinks 1.405        
cufflinks 1.115        
cufflinks 0.93        
cufflinks 1.028        
cufflinks 0.644        

0 Strain