Gene : Medtr3g008630 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF05479 - Photosystem I reaction centre subunit N (PSAN or PSI-N) (PsaN) Description:  photosystem I reaction center subunit N
Genomic Order:  220 Name:  ? Medtr3g008630
Secondary Identifier:  ? PAC:31057632
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g008630 0.5kb upstream 0.5kb upstream 1236 true chr3: 1602922-1604157 Medicago truncatula
Medtr3g008630 0.5kb upstream 0.5kb upstream 500 false chr3: 1602922-1603421 Medicago truncatula
Medtr3g008630 0.5kb downstream 0.5kb downstream 1236 true chr3: 1603422-1604657 Medicago truncatula
Medtr3g008630 0.5kb downstream 0.5kb downstream 500 false chr3: 1604158-1604657 Medicago truncatula
Medtr3g008630 1.0kb upstream 1.0kb upstream 1736 true chr3: 1602422-1604157 Medicago truncatula
Medtr3g008630 1.0kb upstream 1.0kb upstream 1000 false chr3: 1602422-1603421 Medicago truncatula
Medtr3g008630 1.0kb downstream 1.0kb downstream 1736 true chr3: 1603422-1605157 Medicago truncatula
Medtr3g008630 1.0kb downstream 1.0kb downstream 1000 false chr3: 1604158-1605157 Medicago truncatula
Medtr3g008630 2.0kb upstream 2.0kb upstream 2736 true chr3: 1601422-1604157 Medicago truncatula
Medtr3g008630 2.0kb upstream 2.0kb upstream 2000 false chr3: 1601422-1603421 Medicago truncatula
Medtr3g008630 2.0kb downstream 2.0kb downstream 2736 true chr3: 1603422-1606157 Medicago truncatula
Medtr3g008630 2.0kb downstream 2.0kb downstream 2000 false chr3: 1604158-1606157 Medicago truncatula
Medtr3g008630 5.0kb upstream 5.0kb upstream 5736 true chr3: 1598422-1604157 Medicago truncatula
Medtr3g008630 5.0kb upstream 5.0kb upstream 5000 false chr3: 1598422-1603421 Medicago truncatula
Medtr3g008630 5.0kb downstream 5.0kb downstream 5736 true chr3: 1603422-1609157 Medicago truncatula
Medtr3g008630 5.0kb downstream 5.0kb downstream 5000 false chr3: 1604158-1609157 Medicago truncatula
Medtr3g008630 10.0kb upstream 10.0kb upstream 10736 true chr3: 1593422-1604157 Medicago truncatula
Medtr3g008630 10.0kb upstream 10.0kb upstream 10000 false chr3: 1593422-1603421 Medicago truncatula
Medtr3g008630 10.0kb downstream 10.0kb downstream 10736 true chr3: 1603422-1614157 Medicago truncatula
Medtr3g008630 10.0kb downstream 10.0kb downstream 10000 false chr3: 1604158-1614157 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304642 5265 Fabidae View MSA
124067734 5270 Rosid View MSA
123736810 5271 Pentapetalae View MSA
122791162 5272 Eudicot View MSA
122050730 5273 Angiosperm View MSA
121348092 5274 Embryophyte View MSA
123425572 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 21.946     High  
cufflinks 17.574     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 37.342     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 22.133     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain