Gene : Medtr3g009530 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11689:SF77 - CHLORIDE CHANNEL PROTEIN CLC-F Description:  ClC chloride channel family protein
Genomic Order:  268 Name:  ? Medtr3g009530
Secondary Identifier:  ? PAC:31053582
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g009530 0.5kb upstream 0.5kb upstream 9530 true chr3: 2079303-2088832 Medicago truncatula
Medtr3g009530 0.5kb upstream 0.5kb upstream 500 false chr3: 2088333-2088832 Medicago truncatula
Medtr3g009530 0.5kb downstream 0.5kb downstream 9530 true chr3: 2078803-2088332 Medicago truncatula
Medtr3g009530 0.5kb downstream 0.5kb downstream 500 false chr3: 2078803-2079302 Medicago truncatula
Medtr3g009530 1.0kb upstream 1.0kb upstream 10030 true chr3: 2079303-2089332 Medicago truncatula
Medtr3g009530 1.0kb upstream 1.0kb upstream 1000 false chr3: 2088333-2089332 Medicago truncatula
Medtr3g009530 1.0kb downstream 1.0kb downstream 10030 true chr3: 2078303-2088332 Medicago truncatula
Medtr3g009530 1.0kb downstream 1.0kb downstream 1000 false chr3: 2078303-2079302 Medicago truncatula
Medtr3g009530 2.0kb upstream 2.0kb upstream 11030 true chr3: 2079303-2090332 Medicago truncatula
Medtr3g009530 2.0kb upstream 2.0kb upstream 2000 false chr3: 2088333-2090332 Medicago truncatula
Medtr3g009530 2.0kb downstream 2.0kb downstream 11030 true chr3: 2077303-2088332 Medicago truncatula
Medtr3g009530 2.0kb downstream 2.0kb downstream 2000 false chr3: 2077303-2079302 Medicago truncatula
Medtr3g009530 5.0kb upstream 5.0kb upstream 14030 true chr3: 2079303-2093332 Medicago truncatula
Medtr3g009530 5.0kb upstream 5.0kb upstream 5000 false chr3: 2088333-2093332 Medicago truncatula
Medtr3g009530 5.0kb downstream 5.0kb downstream 14030 true chr3: 2074303-2088332 Medicago truncatula
Medtr3g009530 5.0kb downstream 5.0kb downstream 5000 false chr3: 2074303-2079302 Medicago truncatula
Medtr3g009530 10.0kb upstream 10.0kb upstream 19030 true chr3: 2079303-2098332 Medicago truncatula
Medtr3g009530 10.0kb upstream 10.0kb upstream 10000 false chr3: 2088333-2098332 Medicago truncatula
Medtr3g009530 10.0kb downstream 10.0kb downstream 19030 true chr3: 2069303-2088332 Medicago truncatula
Medtr3g009530 10.0kb downstream 10.0kb downstream 10000 false chr3: 2069303-2079302 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306331 5265 Fabidae View MSA
124064511 5270 Rosid View MSA
123748133 5271 Pentapetalae View MSA
122793511 5272 Eudicot View MSA
122047702 5273 Angiosperm View MSA
121347705 5274 Embryophyte View MSA
123427001 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.065        
cufflinks 0.878        
cufflinks 0.838        
cufflinks 0.417       Low
cufflinks 1.024        
cufflinks 0.463       Low
cufflinks 1.052        
cufflinks 0.698        
cufflinks 0.921        

0 Strain