Gene : Medtr3g009740 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR34562:SF1 - WPP DOMAIN-INTERACTING PROTEIN 2-RELATED Description:  WPP domain interacting protein, putative
Genomic Order:  273 Name:  ? Medtr3g009740
Secondary Identifier:  ? PAC:31053381
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g009740 0.5kb upstream 0.5kb upstream 4274 true chr3: 2139108-2143381 Medicago truncatula
Medtr3g009740 0.5kb upstream 0.5kb upstream 500 false chr3: 2139108-2139607 Medicago truncatula
Medtr3g009740 0.5kb downstream 0.5kb downstream 4274 true chr3: 2139608-2143881 Medicago truncatula
Medtr3g009740 0.5kb downstream 0.5kb downstream 500 false chr3: 2143382-2143881 Medicago truncatula
Medtr3g009740 1.0kb upstream 1.0kb upstream 4774 true chr3: 2138608-2143381 Medicago truncatula
Medtr3g009740 1.0kb upstream 1.0kb upstream 1000 false chr3: 2138608-2139607 Medicago truncatula
Medtr3g009740 1.0kb downstream 1.0kb downstream 4774 true chr3: 2139608-2144381 Medicago truncatula
Medtr3g009740 1.0kb downstream 1.0kb downstream 1000 false chr3: 2143382-2144381 Medicago truncatula
Medtr3g009740 2.0kb upstream 2.0kb upstream 5774 true chr3: 2137608-2143381 Medicago truncatula
Medtr3g009740 2.0kb upstream 2.0kb upstream 2000 false chr3: 2137608-2139607 Medicago truncatula
Medtr3g009740 2.0kb downstream 2.0kb downstream 5774 true chr3: 2139608-2145381 Medicago truncatula
Medtr3g009740 2.0kb downstream 2.0kb downstream 2000 false chr3: 2143382-2145381 Medicago truncatula
Medtr3g009740 5.0kb upstream 5.0kb upstream 8774 true chr3: 2134608-2143381 Medicago truncatula
Medtr3g009740 5.0kb upstream 5.0kb upstream 5000 false chr3: 2134608-2139607 Medicago truncatula
Medtr3g009740 5.0kb downstream 5.0kb downstream 8774 true chr3: 2139608-2148381 Medicago truncatula
Medtr3g009740 5.0kb downstream 5.0kb downstream 5000 false chr3: 2143382-2148381 Medicago truncatula
Medtr3g009740 10.0kb upstream 10.0kb upstream 13774 true chr3: 2129608-2143381 Medicago truncatula
Medtr3g009740 10.0kb upstream 10.0kb upstream 10000 false chr3: 2129608-2139607 Medicago truncatula
Medtr3g009740 10.0kb downstream 10.0kb downstream 13774 true chr3: 2139608-2153381 Medicago truncatula
Medtr3g009740 10.0kb downstream 10.0kb downstream 10000 false chr3: 2143382-2153381 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301998 5265 Fabidae View MSA
124061399 5270 Rosid View MSA
123751814 5271 Pentapetalae View MSA
122794604 5272 Eudicot View MSA
122049938 5273 Angiosperm View MSA
121311655 5274 Embryophyte View MSA
123348925 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.39     High  
cufflinks 20.189     High  
cufflinks 24.143     High High
cufflinks 9.345     High Low
cufflinks 21.307     High  
cufflinks 8.817       Low
cufflinks 15.231     High  
cufflinks 21.577     High  
cufflinks 10.64     High  

0 Strain