Gene : Medtr3g009280 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR24193//PTHR24193:SF88 - ANKYRIN REPEAT PROTEIN Description:  TGB12K interacting protein
Genomic Order:  251 Name:  ? Medtr3g009280
Secondary Identifier:  ? PAC:31056780
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g009280 0.5kb upstream 0.5kb upstream 5466 true chr3: 1920717-1926182 Medicago truncatula
Medtr3g009280 0.5kb upstream 0.5kb upstream 500 false chr3: 1920717-1921216 Medicago truncatula
Medtr3g009280 0.5kb downstream 0.5kb downstream 5466 true chr3: 1921217-1926682 Medicago truncatula
Medtr3g009280 0.5kb downstream 0.5kb downstream 500 false chr3: 1926183-1926682 Medicago truncatula
Medtr3g009280 1.0kb upstream 1.0kb upstream 5966 true chr3: 1920217-1926182 Medicago truncatula
Medtr3g009280 1.0kb upstream 1.0kb upstream 1000 false chr3: 1920217-1921216 Medicago truncatula
Medtr3g009280 1.0kb downstream 1.0kb downstream 5966 true chr3: 1921217-1927182 Medicago truncatula
Medtr3g009280 1.0kb downstream 1.0kb downstream 1000 false chr3: 1926183-1927182 Medicago truncatula
Medtr3g009280 2.0kb upstream 2.0kb upstream 6966 true chr3: 1919217-1926182 Medicago truncatula
Medtr3g009280 2.0kb upstream 2.0kb upstream 2000 false chr3: 1919217-1921216 Medicago truncatula
Medtr3g009280 2.0kb downstream 2.0kb downstream 6966 true chr3: 1921217-1928182 Medicago truncatula
Medtr3g009280 2.0kb downstream 2.0kb downstream 2000 false chr3: 1926183-1928182 Medicago truncatula
Medtr3g009280 5.0kb upstream 5.0kb upstream 9966 true chr3: 1916217-1926182 Medicago truncatula
Medtr3g009280 5.0kb upstream 5.0kb upstream 5000 false chr3: 1916217-1921216 Medicago truncatula
Medtr3g009280 5.0kb downstream 5.0kb downstream 9966 true chr3: 1921217-1931182 Medicago truncatula
Medtr3g009280 5.0kb downstream 5.0kb downstream 5000 false chr3: 1926183-1931182 Medicago truncatula
Medtr3g009280 10.0kb upstream 10.0kb upstream 14966 true chr3: 1911217-1926182 Medicago truncatula
Medtr3g009280 10.0kb upstream 10.0kb upstream 10000 false chr3: 1911217-1921216 Medicago truncatula
Medtr3g009280 10.0kb downstream 10.0kb downstream 14966 true chr3: 1921217-1936182 Medicago truncatula
Medtr3g009280 10.0kb downstream 10.0kb downstream 10000 false chr3: 1926183-1936182 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314471 5265 Fabidae View MSA
124068894 5270 Rosid View MSA
123744491 5271 Pentapetalae View MSA
122791485 5272 Eudicot View MSA
122047737 5273 Angiosperm View MSA
121344886 5274 Embryophyte View MSA
123428373 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.224     High  
cufflinks 54.978     High  
cufflinks 49.359     High  
cufflinks 12.526     High  
cufflinks 56.067     High  
cufflinks 5.347       Low
cufflinks 17.679     High  
cufflinks 51.887     High  
cufflinks 31.712     High  

0 Strain