Gene : Medtr3g009020 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR10551//PTHR10551:SF13 - FASCIN Description:  glycoside hydrolase family 5 protein
Genomic Order:  236 Name:  ? Medtr3g009020
Secondary Identifier:  ? PAC:31060608
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g009020 0.5kb upstream 0.5kb upstream 4509 true chr3: 1747885-1752393 Medicago truncatula
Medtr3g009020 0.5kb upstream 0.5kb upstream 500 false chr3: 1751894-1752393 Medicago truncatula
Medtr3g009020 0.5kb downstream 0.5kb downstream 4509 true chr3: 1747385-1751893 Medicago truncatula
Medtr3g009020 0.5kb downstream 0.5kb downstream 500 false chr3: 1747385-1747884 Medicago truncatula
Medtr3g009020 1.0kb upstream 1.0kb upstream 5009 true chr3: 1747885-1752893 Medicago truncatula
Medtr3g009020 1.0kb upstream 1.0kb upstream 1000 false chr3: 1751894-1752893 Medicago truncatula
Medtr3g009020 1.0kb downstream 1.0kb downstream 5009 true chr3: 1746885-1751893 Medicago truncatula
Medtr3g009020 1.0kb downstream 1.0kb downstream 1000 false chr3: 1746885-1747884 Medicago truncatula
Medtr3g009020 2.0kb upstream 2.0kb upstream 6009 true chr3: 1747885-1753893 Medicago truncatula
Medtr3g009020 2.0kb upstream 2.0kb upstream 2000 false chr3: 1751894-1753893 Medicago truncatula
Medtr3g009020 2.0kb downstream 2.0kb downstream 6009 true chr3: 1745885-1751893 Medicago truncatula
Medtr3g009020 2.0kb downstream 2.0kb downstream 2000 false chr3: 1745885-1747884 Medicago truncatula
Medtr3g009020 5.0kb upstream 5.0kb upstream 9009 true chr3: 1747885-1756893 Medicago truncatula
Medtr3g009020 5.0kb upstream 5.0kb upstream 5000 false chr3: 1751894-1756893 Medicago truncatula
Medtr3g009020 5.0kb downstream 5.0kb downstream 9009 true chr3: 1742885-1751893 Medicago truncatula
Medtr3g009020 5.0kb downstream 5.0kb downstream 5000 false chr3: 1742885-1747884 Medicago truncatula
Medtr3g009020 10.0kb upstream 10.0kb upstream 14009 true chr3: 1747885-1761893 Medicago truncatula
Medtr3g009020 10.0kb upstream 10.0kb upstream 10000 false chr3: 1751894-1761893 Medicago truncatula
Medtr3g009020 10.0kb downstream 10.0kb downstream 14009 true chr3: 1737885-1751893 Medicago truncatula
Medtr3g009020 10.0kb downstream 10.0kb downstream 10000 false chr3: 1737885-1747884 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313433 5265 Fabidae View MSA
124070042 5270 Rosid View MSA
123746465 5271 Pentapetalae View MSA
122796777 5272 Eudicot View MSA
122048839 5273 Angiosperm View MSA
121348630 5274 Embryophyte View MSA
123380948 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.456       Low
cufflinks 4.7        
cufflinks 7.252        
cufflinks 2.639        
cufflinks 12.288     High High
cufflinks 3.089        
cufflinks 8.926       High
cufflinks 4.889        
cufflinks 3.671        

0 Strain