Gene : Medtr3g012540 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12899:SF5 - RIBOSOMAL L18P/L5E FAMILY PROTEIN Description:  structural constituent of ribosome protein
Genomic Order:  453 Name:  ? Medtr3g012540
Secondary Identifier:  ? PAC:31061462
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g012540 0.5kb upstream 0.5kb upstream 4308 true chr3: 3535836-3540143 Medicago truncatula
Medtr3g012540 0.5kb upstream 0.5kb upstream 500 false chr3: 3539644-3540143 Medicago truncatula
Medtr3g012540 0.5kb downstream 0.5kb downstream 4308 true chr3: 3535336-3539643 Medicago truncatula
Medtr3g012540 0.5kb downstream 0.5kb downstream 500 false chr3: 3535336-3535835 Medicago truncatula
Medtr3g012540 1.0kb upstream 1.0kb upstream 4808 true chr3: 3535836-3540643 Medicago truncatula
Medtr3g012540 1.0kb upstream 1.0kb upstream 1000 false chr3: 3539644-3540643 Medicago truncatula
Medtr3g012540 1.0kb downstream 1.0kb downstream 4808 true chr3: 3534836-3539643 Medicago truncatula
Medtr3g012540 1.0kb downstream 1.0kb downstream 1000 false chr3: 3534836-3535835 Medicago truncatula
Medtr3g012540 2.0kb upstream 2.0kb upstream 5808 true chr3: 3535836-3541643 Medicago truncatula
Medtr3g012540 2.0kb upstream 2.0kb upstream 2000 false chr3: 3539644-3541643 Medicago truncatula
Medtr3g012540 2.0kb downstream 2.0kb downstream 5808 true chr3: 3533836-3539643 Medicago truncatula
Medtr3g012540 2.0kb downstream 2.0kb downstream 2000 false chr3: 3533836-3535835 Medicago truncatula
Medtr3g012540 5.0kb upstream 5.0kb upstream 8808 true chr3: 3535836-3544643 Medicago truncatula
Medtr3g012540 5.0kb upstream 5.0kb upstream 5000 false chr3: 3539644-3544643 Medicago truncatula
Medtr3g012540 5.0kb downstream 5.0kb downstream 8808 true chr3: 3530836-3539643 Medicago truncatula
Medtr3g012540 5.0kb downstream 5.0kb downstream 5000 false chr3: 3530836-3535835 Medicago truncatula
Medtr3g012540 10.0kb upstream 10.0kb upstream 13808 true chr3: 3535836-3549643 Medicago truncatula
Medtr3g012540 10.0kb upstream 10.0kb upstream 10000 false chr3: 3539644-3549643 Medicago truncatula
Medtr3g012540 10.0kb downstream 10.0kb downstream 13808 true chr3: 3525836-3539643 Medicago truncatula
Medtr3g012540 10.0kb downstream 10.0kb downstream 10000 false chr3: 3525836-3535835 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303550 5265 Fabidae View MSA
124063068 5270 Rosid View MSA
123738575 5271 Pentapetalae View MSA
122789251 5272 Eudicot View MSA
122043633 5273 Angiosperm View MSA
121351328 5274 Embryophyte View MSA
123382121 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.218        
cufflinks 1.089        
cufflinks 1.406        
cufflinks 1.214        
cufflinks 1.675       High
cufflinks 0.417       Low
cufflinks 0.742        
cufflinks 1.036        
cufflinks 0.69        

0 Strain