Gene : Medtr3g014660 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31604:SF2 - PROTEIN SHI RELATED SEQUENCE 6 Description:  LRP1 carboxy-terminal domain protein
Genomic Order:  541 Name:  ? Medtr3g014660
Secondary Identifier:  ? PAC:31060326
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g014660 0.5kb upstream 0.5kb upstream 6025 true chr3: 4198130-4204154 Medicago truncatula
Medtr3g014660 0.5kb upstream 0.5kb upstream 500 false chr3: 4203655-4204154 Medicago truncatula
Medtr3g014660 0.5kb downstream 0.5kb downstream 6025 true chr3: 4197630-4203654 Medicago truncatula
Medtr3g014660 0.5kb downstream 0.5kb downstream 500 false chr3: 4197630-4198129 Medicago truncatula
Medtr3g014660 1.0kb upstream 1.0kb upstream 6525 true chr3: 4198130-4204654 Medicago truncatula
Medtr3g014660 1.0kb upstream 1.0kb upstream 1000 false chr3: 4203655-4204654 Medicago truncatula
Medtr3g014660 1.0kb downstream 1.0kb downstream 6525 true chr3: 4197130-4203654 Medicago truncatula
Medtr3g014660 1.0kb downstream 1.0kb downstream 1000 false chr3: 4197130-4198129 Medicago truncatula
Medtr3g014660 2.0kb upstream 2.0kb upstream 7525 true chr3: 4198130-4205654 Medicago truncatula
Medtr3g014660 2.0kb upstream 2.0kb upstream 2000 false chr3: 4203655-4205654 Medicago truncatula
Medtr3g014660 2.0kb downstream 2.0kb downstream 7525 true chr3: 4196130-4203654 Medicago truncatula
Medtr3g014660 2.0kb downstream 2.0kb downstream 2000 false chr3: 4196130-4198129 Medicago truncatula
Medtr3g014660 5.0kb upstream 5.0kb upstream 10525 true chr3: 4198130-4208654 Medicago truncatula
Medtr3g014660 5.0kb upstream 5.0kb upstream 5000 false chr3: 4203655-4208654 Medicago truncatula
Medtr3g014660 5.0kb downstream 5.0kb downstream 10525 true chr3: 4193130-4203654 Medicago truncatula
Medtr3g014660 5.0kb downstream 5.0kb downstream 5000 false chr3: 4193130-4198129 Medicago truncatula
Medtr3g014660 10.0kb upstream 10.0kb upstream 15525 true chr3: 4198130-4213654 Medicago truncatula
Medtr3g014660 10.0kb upstream 10.0kb upstream 10000 false chr3: 4203655-4213654 Medicago truncatula
Medtr3g014660 10.0kb downstream 10.0kb downstream 15525 true chr3: 4188130-4203654 Medicago truncatula
Medtr3g014660 10.0kb downstream 10.0kb downstream 10000 false chr3: 4188130-4198129 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302591 5265 Fabidae View MSA
124069167 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.241       High
cufflinks 0.406        
cufflinks 0.238        
cufflinks 0.107       Low
cufflinks 0.332        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.213        
cufflinks 0.277        
cufflinks 0.19        

0 Strain