Gene : Medtr3g014650 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23086:SF29 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 6 Description:  phosphatidylinositol-4-phosphate 5-kinase family protein
Genomic Order:  540 Name:  ? Medtr3g014650
Secondary Identifier:  ? PAC:31060415
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6351 Medicago truncatula pathologic  
Mtruncatula PWY-6352 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g014650 0.5kb upstream 0.5kb upstream 5122 true chr3: 4191938-4197059 Medicago truncatula
Medtr3g014650 0.5kb upstream 0.5kb upstream 500 false chr3: 4191938-4192437 Medicago truncatula
Medtr3g014650 0.5kb downstream 0.5kb downstream 5122 true chr3: 4192438-4197559 Medicago truncatula
Medtr3g014650 0.5kb downstream 0.5kb downstream 500 false chr3: 4197060-4197559 Medicago truncatula
Medtr3g014650 1.0kb upstream 1.0kb upstream 5622 true chr3: 4191438-4197059 Medicago truncatula
Medtr3g014650 1.0kb upstream 1.0kb upstream 1000 false chr3: 4191438-4192437 Medicago truncatula
Medtr3g014650 1.0kb downstream 1.0kb downstream 5622 true chr3: 4192438-4198059 Medicago truncatula
Medtr3g014650 1.0kb downstream 1.0kb downstream 1000 false chr3: 4197060-4198059 Medicago truncatula
Medtr3g014650 2.0kb upstream 2.0kb upstream 6622 true chr3: 4190438-4197059 Medicago truncatula
Medtr3g014650 2.0kb upstream 2.0kb upstream 2000 false chr3: 4190438-4192437 Medicago truncatula
Medtr3g014650 2.0kb downstream 2.0kb downstream 6622 true chr3: 4192438-4199059 Medicago truncatula
Medtr3g014650 2.0kb downstream 2.0kb downstream 2000 false chr3: 4197060-4199059 Medicago truncatula
Medtr3g014650 5.0kb upstream 5.0kb upstream 9622 true chr3: 4187438-4197059 Medicago truncatula
Medtr3g014650 5.0kb upstream 5.0kb upstream 5000 false chr3: 4187438-4192437 Medicago truncatula
Medtr3g014650 5.0kb downstream 5.0kb downstream 9622 true chr3: 4192438-4202059 Medicago truncatula
Medtr3g014650 5.0kb downstream 5.0kb downstream 5000 false chr3: 4197060-4202059 Medicago truncatula
Medtr3g014650 10.0kb upstream 10.0kb upstream 14622 true chr3: 4182438-4197059 Medicago truncatula
Medtr3g014650 10.0kb upstream 10.0kb upstream 10000 false chr3: 4182438-4192437 Medicago truncatula
Medtr3g014650 10.0kb downstream 10.0kb downstream 14622 true chr3: 4192438-4207059 Medicago truncatula
Medtr3g014650 10.0kb downstream 10.0kb downstream 10000 false chr3: 4197060-4207059 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296148 5265 Fabidae View MSA
124073684 5270 Rosid View MSA
123747330 5271 Pentapetalae View MSA
122788169 5272 Eudicot View MSA
122047903 5273 Angiosperm View MSA
121310813 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.062     Low  
cufflinks 0.056     Low  
cufflinks 0.029     Low  
cufflinks 0.016     Low Low
cufflinks 0.081       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.027     Low  
cufflinks 0.024     Low  

0 Strain