Gene : Medtr3g078120 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR14155//PTHR14155:SF103 - RING FINGER DOMAIN-CONTAINING Description:  zinc finger, C3HC4 type (RING finger) protein
Genomic Order:  3950 Name:  ? Medtr3g078120
Secondary Identifier:  ? PAC:31054098
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g078120 0.5kb upstream 0.5kb upstream 1292 true chr3: 35193586-35194877 Medicago truncatula
Medtr3g078120 0.5kb upstream 0.5kb upstream 500 false chr3: 35193586-35194085 Medicago truncatula
Medtr3g078120 0.5kb downstream 0.5kb downstream 1292 true chr3: 35194086-35195377 Medicago truncatula
Medtr3g078120 0.5kb downstream 0.5kb downstream 500 false chr3: 35194878-35195377 Medicago truncatula
Medtr3g078120 1.0kb upstream 1.0kb upstream 1792 true chr3: 35193086-35194877 Medicago truncatula
Medtr3g078120 1.0kb upstream 1.0kb upstream 1000 false chr3: 35193086-35194085 Medicago truncatula
Medtr3g078120 1.0kb downstream 1.0kb downstream 1792 true chr3: 35194086-35195877 Medicago truncatula
Medtr3g078120 1.0kb downstream 1.0kb downstream 1000 false chr3: 35194878-35195877 Medicago truncatula
Medtr3g078120 2.0kb upstream 2.0kb upstream 2792 true chr3: 35192086-35194877 Medicago truncatula
Medtr3g078120 2.0kb upstream 2.0kb upstream 2000 false chr3: 35192086-35194085 Medicago truncatula
Medtr3g078120 2.0kb downstream 2.0kb downstream 2792 true chr3: 35194086-35196877 Medicago truncatula
Medtr3g078120 2.0kb downstream 2.0kb downstream 2000 false chr3: 35194878-35196877 Medicago truncatula
Medtr3g078120 5.0kb upstream 5.0kb upstream 5792 true chr3: 35189086-35194877 Medicago truncatula
Medtr3g078120 5.0kb upstream 5.0kb upstream 5000 false chr3: 35189086-35194085 Medicago truncatula
Medtr3g078120 5.0kb downstream 5.0kb downstream 5792 true chr3: 35194086-35199877 Medicago truncatula
Medtr3g078120 5.0kb downstream 5.0kb downstream 5000 false chr3: 35194878-35199877 Medicago truncatula
Medtr3g078120 10.0kb upstream 10.0kb upstream 10792 true chr3: 35184086-35194877 Medicago truncatula
Medtr3g078120 10.0kb upstream 10.0kb upstream 10000 false chr3: 35184086-35194085 Medicago truncatula
Medtr3g078120 10.0kb downstream 10.0kb downstream 10792 true chr3: 35194086-35204877 Medicago truncatula
Medtr3g078120 10.0kb downstream 10.0kb downstream 10000 false chr3: 35194878-35204877 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310591 5265 Fabidae View MSA
124074887 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.236        
cufflinks 0.268        
cufflinks 0.038     Low Low
cufflinks 1.621       High
cufflinks 0.038     Low Low
cufflinks 1.948       High
cufflinks 0.185        
cufflinks 0.048     Low Low
cufflinks 0.382        

0 Strain