Gene : Medtr3g078110 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23257//PTHR23257:SF511 - SERINE-THREONINE PROTEIN KINASE Description:  Serine/Threonine-kinase HT1-like protein
Genomic Order:  3949 Name:  ? Medtr3g078110
Secondary Identifier:  ? PAC:31058266
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g078110 0.5kb upstream 0.5kb upstream 3348 true chr3: 35188804-35192151 Medicago truncatula
Medtr3g078110 0.5kb upstream 0.5kb upstream 500 false chr3: 35188804-35189303 Medicago truncatula
Medtr3g078110 0.5kb downstream 0.5kb downstream 3348 true chr3: 35189304-35192651 Medicago truncatula
Medtr3g078110 0.5kb downstream 0.5kb downstream 500 false chr3: 35192152-35192651 Medicago truncatula
Medtr3g078110 1.0kb upstream 1.0kb upstream 3848 true chr3: 35188304-35192151 Medicago truncatula
Medtr3g078110 1.0kb upstream 1.0kb upstream 1000 false chr3: 35188304-35189303 Medicago truncatula
Medtr3g078110 1.0kb downstream 1.0kb downstream 3848 true chr3: 35189304-35193151 Medicago truncatula
Medtr3g078110 1.0kb downstream 1.0kb downstream 1000 false chr3: 35192152-35193151 Medicago truncatula
Medtr3g078110 2.0kb upstream 2.0kb upstream 4848 true chr3: 35187304-35192151 Medicago truncatula
Medtr3g078110 2.0kb upstream 2.0kb upstream 2000 false chr3: 35187304-35189303 Medicago truncatula
Medtr3g078110 2.0kb downstream 2.0kb downstream 4848 true chr3: 35189304-35194151 Medicago truncatula
Medtr3g078110 2.0kb downstream 2.0kb downstream 2000 false chr3: 35192152-35194151 Medicago truncatula
Medtr3g078110 5.0kb upstream 5.0kb upstream 7848 true chr3: 35184304-35192151 Medicago truncatula
Medtr3g078110 5.0kb upstream 5.0kb upstream 5000 false chr3: 35184304-35189303 Medicago truncatula
Medtr3g078110 5.0kb downstream 5.0kb downstream 7848 true chr3: 35189304-35197151 Medicago truncatula
Medtr3g078110 5.0kb downstream 5.0kb downstream 5000 false chr3: 35192152-35197151 Medicago truncatula
Medtr3g078110 10.0kb upstream 10.0kb upstream 12848 true chr3: 35179304-35192151 Medicago truncatula
Medtr3g078110 10.0kb upstream 10.0kb upstream 10000 false chr3: 35179304-35189303 Medicago truncatula
Medtr3g078110 10.0kb downstream 10.0kb downstream 12848 true chr3: 35189304-35202151 Medicago truncatula
Medtr3g078110 10.0kb downstream 10.0kb downstream 10000 false chr3: 35192152-35202151 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315425 5265 Fabidae View MSA
124069596 5270 Rosid View MSA
123751739 5271 Pentapetalae View MSA
122795785 5272 Eudicot View MSA
122041918 5273 Angiosperm View MSA
121348422 5274 Embryophyte View MSA
123380860 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.044     Low  
cufflinks 1.207        
cufflinks 1.569        
cufflinks 0.008     Low Low
cufflinks 1.69        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.919        
cufflinks 0.011     Low Low

0 Strain