Gene : Medtr3g078030 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  3943
Name:  ? Medtr3g078030 Secondary Identifier:  ? PAC:31056989
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g078030 0.5kb upstream 0.5kb upstream 4364 true chr3: 35158207-35162570 Medicago truncatula
Medtr3g078030 0.5kb upstream 0.5kb upstream 500 false chr3: 35162071-35162570 Medicago truncatula
Medtr3g078030 0.5kb downstream 0.5kb downstream 4364 true chr3: 35157707-35162070 Medicago truncatula
Medtr3g078030 0.5kb downstream 0.5kb downstream 500 false chr3: 35157707-35158206 Medicago truncatula
Medtr3g078030 1.0kb upstream 1.0kb upstream 4864 true chr3: 35158207-35163070 Medicago truncatula
Medtr3g078030 1.0kb upstream 1.0kb upstream 1000 false chr3: 35162071-35163070 Medicago truncatula
Medtr3g078030 1.0kb downstream 1.0kb downstream 4864 true chr3: 35157207-35162070 Medicago truncatula
Medtr3g078030 1.0kb downstream 1.0kb downstream 1000 false chr3: 35157207-35158206 Medicago truncatula
Medtr3g078030 2.0kb upstream 2.0kb upstream 5864 true chr3: 35158207-35164070 Medicago truncatula
Medtr3g078030 2.0kb upstream 2.0kb upstream 2000 false chr3: 35162071-35164070 Medicago truncatula
Medtr3g078030 2.0kb downstream 2.0kb downstream 5864 true chr3: 35156207-35162070 Medicago truncatula
Medtr3g078030 2.0kb downstream 2.0kb downstream 2000 false chr3: 35156207-35158206 Medicago truncatula
Medtr3g078030 5.0kb upstream 5.0kb upstream 8864 true chr3: 35158207-35167070 Medicago truncatula
Medtr3g078030 5.0kb upstream 5.0kb upstream 5000 false chr3: 35162071-35167070 Medicago truncatula
Medtr3g078030 5.0kb downstream 5.0kb downstream 8864 true chr3: 35153207-35162070 Medicago truncatula
Medtr3g078030 5.0kb downstream 5.0kb downstream 5000 false chr3: 35153207-35158206 Medicago truncatula
Medtr3g078030 10.0kb upstream 10.0kb upstream 13864 true chr3: 35158207-35172070 Medicago truncatula
Medtr3g078030 10.0kb upstream 10.0kb upstream 10000 false chr3: 35162071-35172070 Medicago truncatula
Medtr3g078030 10.0kb downstream 10.0kb downstream 13864 true chr3: 35148207-35162070 Medicago truncatula
Medtr3g078030 10.0kb downstream 10.0kb downstream 10000 false chr3: 35148207-35158206 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305906 5265 Fabidae View MSA
124060482 5270 Rosid View MSA
123739392 5271 Pentapetalae View MSA
122790873 5272 Eudicot View MSA
122045595 5273 Angiosperm View MSA
121345688 5274 Embryophyte View MSA
123425911 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.893        
cufflinks 3.837        
cufflinks 6.497        
cufflinks 6.108        
cufflinks 5.674        
cufflinks 3.037       Low
cufflinks 7.284       High
cufflinks 5.352        
cufflinks 6.207        

0 Strain