Gene : Medtr3g078850 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR20973 - NON-SMC ELEMENT 1-RELATED Description:  Nse1 non-SMC component of SMC5-6 complex family protein
Genomic Order:  4007 Name:  ? Medtr3g078850
Secondary Identifier:  ? PAC:31060043
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g078850 0.5kb upstream 0.5kb upstream 5373 true chr3: 35597757-35603129 Medicago truncatula
Medtr3g078850 0.5kb upstream 0.5kb upstream 500 false chr3: 35602630-35603129 Medicago truncatula
Medtr3g078850 0.5kb downstream 0.5kb downstream 5373 true chr3: 35597257-35602629 Medicago truncatula
Medtr3g078850 0.5kb downstream 0.5kb downstream 500 false chr3: 35597257-35597756 Medicago truncatula
Medtr3g078850 1.0kb upstream 1.0kb upstream 5873 true chr3: 35597757-35603629 Medicago truncatula
Medtr3g078850 1.0kb upstream 1.0kb upstream 1000 false chr3: 35602630-35603629 Medicago truncatula
Medtr3g078850 1.0kb downstream 1.0kb downstream 5873 true chr3: 35596757-35602629 Medicago truncatula
Medtr3g078850 1.0kb downstream 1.0kb downstream 1000 false chr3: 35596757-35597756 Medicago truncatula
Medtr3g078850 2.0kb upstream 2.0kb upstream 6873 true chr3: 35597757-35604629 Medicago truncatula
Medtr3g078850 2.0kb upstream 2.0kb upstream 2000 false chr3: 35602630-35604629 Medicago truncatula
Medtr3g078850 2.0kb downstream 2.0kb downstream 6873 true chr3: 35595757-35602629 Medicago truncatula
Medtr3g078850 2.0kb downstream 2.0kb downstream 2000 false chr3: 35595757-35597756 Medicago truncatula
Medtr3g078850 5.0kb upstream 5.0kb upstream 9873 true chr3: 35597757-35607629 Medicago truncatula
Medtr3g078850 5.0kb upstream 5.0kb upstream 5000 false chr3: 35602630-35607629 Medicago truncatula
Medtr3g078850 5.0kb downstream 5.0kb downstream 9873 true chr3: 35592757-35602629 Medicago truncatula
Medtr3g078850 5.0kb downstream 5.0kb downstream 5000 false chr3: 35592757-35597756 Medicago truncatula
Medtr3g078850 10.0kb upstream 10.0kb upstream 14873 true chr3: 35597757-35612629 Medicago truncatula
Medtr3g078850 10.0kb upstream 10.0kb upstream 10000 false chr3: 35602630-35612629 Medicago truncatula
Medtr3g078850 10.0kb downstream 10.0kb downstream 14873 true chr3: 35587757-35602629 Medicago truncatula
Medtr3g078850 10.0kb downstream 10.0kb downstream 10000 false chr3: 35587757-35597756 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306773 5265 Fabidae View MSA
124060843 5270 Rosid View MSA
123738022 5271 Pentapetalae View MSA
122793177 5272 Eudicot View MSA
122042015 5273 Angiosperm View MSA
121350451 5274 Embryophyte View MSA
123426397 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.179       High
cufflinks 0.356        
cufflinks 0.463        
cufflinks 0.7        
cufflinks 0.353        
cufflinks 0.362        
cufflinks 0.692        
cufflinks 0.384        
cufflinks 0.586        

0 Strain