Gene : Medtr3g078647 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED Description:  eukaryotic translation initiation factor 2c, putative
Genomic Order:  3993 Name:  ? Medtr3g078647
Secondary Identifier:  ? PAC:31054216
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g078647 0.5kb upstream 0.5kb upstream 8689 true chr3: 35462004-35470692 Medicago truncatula
Medtr3g078647 0.5kb upstream 0.5kb upstream 500 false chr3: 35462004-35462503 Medicago truncatula
Medtr3g078647 0.5kb downstream 0.5kb downstream 8689 true chr3: 35462504-35471192 Medicago truncatula
Medtr3g078647 0.5kb downstream 0.5kb downstream 500 false chr3: 35470693-35471192 Medicago truncatula
Medtr3g078647 1.0kb upstream 1.0kb upstream 9189 true chr3: 35461504-35470692 Medicago truncatula
Medtr3g078647 1.0kb upstream 1.0kb upstream 1000 false chr3: 35461504-35462503 Medicago truncatula
Medtr3g078647 1.0kb downstream 1.0kb downstream 9189 true chr3: 35462504-35471692 Medicago truncatula
Medtr3g078647 1.0kb downstream 1.0kb downstream 1000 false chr3: 35470693-35471692 Medicago truncatula
Medtr3g078647 2.0kb upstream 2.0kb upstream 10189 true chr3: 35460504-35470692 Medicago truncatula
Medtr3g078647 2.0kb upstream 2.0kb upstream 2000 false chr3: 35460504-35462503 Medicago truncatula
Medtr3g078647 2.0kb downstream 2.0kb downstream 10189 true chr3: 35462504-35472692 Medicago truncatula
Medtr3g078647 2.0kb downstream 2.0kb downstream 2000 false chr3: 35470693-35472692 Medicago truncatula
Medtr3g078647 5.0kb upstream 5.0kb upstream 13189 true chr3: 35457504-35470692 Medicago truncatula
Medtr3g078647 5.0kb upstream 5.0kb upstream 5000 false chr3: 35457504-35462503 Medicago truncatula
Medtr3g078647 5.0kb downstream 5.0kb downstream 13189 true chr3: 35462504-35475692 Medicago truncatula
Medtr3g078647 5.0kb downstream 5.0kb downstream 5000 false chr3: 35470693-35475692 Medicago truncatula
Medtr3g078647 10.0kb upstream 10.0kb upstream 18189 true chr3: 35452504-35470692 Medicago truncatula
Medtr3g078647 10.0kb upstream 10.0kb upstream 10000 false chr3: 35452504-35462503 Medicago truncatula
Medtr3g078647 10.0kb downstream 10.0kb downstream 18189 true chr3: 35462504-35480692 Medicago truncatula
Medtr3g078647 10.0kb downstream 10.0kb downstream 10000 false chr3: 35470693-35480692 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309915 5265 Fabidae View MSA
124060995 5270 Rosid View MSA
123750944 5271 Pentapetalae View MSA
122796647 5272 Eudicot View MSA
122050518 5273 Angiosperm View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.43     High  
cufflinks 11.67     High  
cufflinks 12.201     High  
cufflinks 7.452       Low
cufflinks 16.287     High High
cufflinks 10.092        
cufflinks 10.362     High  
cufflinks 12.112     High  
cufflinks 18.683     High High

0 Strain