Gene : Medtr3g078740 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR11709:SF97 - ASCORBATE OXIDASE-LIKE PROTEIN-RELATED Description:  L-ascorbate oxidase
Genomic Order:  3999 Name:  ? Medtr3g078740
Secondary Identifier:  ? PAC:31057412
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g078740 0.5kb upstream 0.5kb upstream 8335 true chr3: 35534439-35542773 Medicago truncatula
Medtr3g078740 0.5kb upstream 0.5kb upstream 500 false chr3: 35534439-35534938 Medicago truncatula
Medtr3g078740 0.5kb downstream 0.5kb downstream 8335 true chr3: 35534939-35543273 Medicago truncatula
Medtr3g078740 0.5kb downstream 0.5kb downstream 500 false chr3: 35542774-35543273 Medicago truncatula
Medtr3g078740 1.0kb upstream 1.0kb upstream 8835 true chr3: 35533939-35542773 Medicago truncatula
Medtr3g078740 1.0kb upstream 1.0kb upstream 1000 false chr3: 35533939-35534938 Medicago truncatula
Medtr3g078740 1.0kb downstream 1.0kb downstream 8835 true chr3: 35534939-35543773 Medicago truncatula
Medtr3g078740 1.0kb downstream 1.0kb downstream 1000 false chr3: 35542774-35543773 Medicago truncatula
Medtr3g078740 2.0kb upstream 2.0kb upstream 9835 true chr3: 35532939-35542773 Medicago truncatula
Medtr3g078740 2.0kb upstream 2.0kb upstream 2000 false chr3: 35532939-35534938 Medicago truncatula
Medtr3g078740 2.0kb downstream 2.0kb downstream 9835 true chr3: 35534939-35544773 Medicago truncatula
Medtr3g078740 2.0kb downstream 2.0kb downstream 2000 false chr3: 35542774-35544773 Medicago truncatula
Medtr3g078740 5.0kb upstream 5.0kb upstream 12835 true chr3: 35529939-35542773 Medicago truncatula
Medtr3g078740 5.0kb upstream 5.0kb upstream 5000 false chr3: 35529939-35534938 Medicago truncatula
Medtr3g078740 5.0kb downstream 5.0kb downstream 12835 true chr3: 35534939-35547773 Medicago truncatula
Medtr3g078740 5.0kb downstream 5.0kb downstream 5000 false chr3: 35542774-35547773 Medicago truncatula
Medtr3g078740 10.0kb upstream 10.0kb upstream 17835 true chr3: 35524939-35542773 Medicago truncatula
Medtr3g078740 10.0kb upstream 10.0kb upstream 10000 false chr3: 35524939-35534938 Medicago truncatula
Medtr3g078740 10.0kb downstream 10.0kb downstream 17835 true chr3: 35534939-35552773 Medicago truncatula
Medtr3g078740 10.0kb downstream 10.0kb downstream 10000 false chr3: 35542774-35552773 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304662 5265 Fabidae View MSA
124063404 5270 Rosid View MSA
123739714 5271 Pentapetalae View MSA
122791263 5272 Eudicot View MSA
122042920 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.495        
cufflinks 0.155        
cufflinks 0.064     Low  
cufflinks 0.088        
cufflinks 0.059     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.394        
cufflinks 0.054     Low  
cufflinks 0.974       High

0 Strain