Gene : Medtr3g078663 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF14770 - Transmembrane protein 18 (TMEM18) Description:  transmembrane protein
Genomic Order:  3995 Name:  ? Medtr3g078663
Secondary Identifier:  ? PAC:31056459
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g078663 0.5kb upstream 0.5kb upstream 3378 true chr3: 35479236-35482613 Medicago truncatula
Medtr3g078663 0.5kb upstream 0.5kb upstream 500 false chr3: 35479236-35479735 Medicago truncatula
Medtr3g078663 0.5kb downstream 0.5kb downstream 3378 true chr3: 35479736-35483113 Medicago truncatula
Medtr3g078663 0.5kb downstream 0.5kb downstream 500 false chr3: 35482614-35483113 Medicago truncatula
Medtr3g078663 1.0kb upstream 1.0kb upstream 3878 true chr3: 35478736-35482613 Medicago truncatula
Medtr3g078663 1.0kb upstream 1.0kb upstream 1000 false chr3: 35478736-35479735 Medicago truncatula
Medtr3g078663 1.0kb downstream 1.0kb downstream 3878 true chr3: 35479736-35483613 Medicago truncatula
Medtr3g078663 1.0kb downstream 1.0kb downstream 1000 false chr3: 35482614-35483613 Medicago truncatula
Medtr3g078663 2.0kb upstream 2.0kb upstream 4878 true chr3: 35477736-35482613 Medicago truncatula
Medtr3g078663 2.0kb upstream 2.0kb upstream 2000 false chr3: 35477736-35479735 Medicago truncatula
Medtr3g078663 2.0kb downstream 2.0kb downstream 4878 true chr3: 35479736-35484613 Medicago truncatula
Medtr3g078663 2.0kb downstream 2.0kb downstream 2000 false chr3: 35482614-35484613 Medicago truncatula
Medtr3g078663 5.0kb upstream 5.0kb upstream 7878 true chr3: 35474736-35482613 Medicago truncatula
Medtr3g078663 5.0kb upstream 5.0kb upstream 5000 false chr3: 35474736-35479735 Medicago truncatula
Medtr3g078663 5.0kb downstream 5.0kb downstream 7878 true chr3: 35479736-35487613 Medicago truncatula
Medtr3g078663 5.0kb downstream 5.0kb downstream 5000 false chr3: 35482614-35487613 Medicago truncatula
Medtr3g078663 10.0kb upstream 10.0kb upstream 12878 true chr3: 35469736-35482613 Medicago truncatula
Medtr3g078663 10.0kb upstream 10.0kb upstream 10000 false chr3: 35469736-35479735 Medicago truncatula
Medtr3g078663 10.0kb downstream 10.0kb downstream 12878 true chr3: 35479736-35492613 Medicago truncatula
Medtr3g078663 10.0kb downstream 10.0kb downstream 10000 false chr3: 35482614-35492613 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305051 5265 Fabidae View MSA
124064626 5270 Rosid View MSA
123738395 5271 Pentapetalae View MSA
122787911 5272 Eudicot View MSA
122046427 5273 Angiosperm View MSA
121346161 5274 Embryophyte View MSA
123424935 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.084       Low
cufflinks 5.374        
cufflinks 5.614        
cufflinks 5.633        
cufflinks 5.584        
cufflinks 5.89        
cufflinks 7.381       High
cufflinks 4.741        
cufflinks 8.258       High

0 Strain