Gene : Medtr3g078550 M. truncatula Mt4.0v1
Defline:  (1 of 3) 1.2.1.19 - Aminobutyraldehyde dehydrogenase / Gamma-guanidinobutyraldehyde dehydrogenase Description:  betaine aldehyde dehydrogenase
Genomic Order:  3981 Name:  ? Medtr3g078550
Secondary Identifier:  ? PAC:31059081
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY1F-353 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g078550 0.5kb upstream 0.5kb upstream 5184 true chr3: 35381638-35386821 Medicago truncatula
Medtr3g078550 0.5kb upstream 0.5kb upstream 500 false chr3: 35381638-35382137 Medicago truncatula
Medtr3g078550 0.5kb downstream 0.5kb downstream 5184 true chr3: 35382138-35387321 Medicago truncatula
Medtr3g078550 0.5kb downstream 0.5kb downstream 500 false chr3: 35386822-35387321 Medicago truncatula
Medtr3g078550 1.0kb upstream 1.0kb upstream 5684 true chr3: 35381138-35386821 Medicago truncatula
Medtr3g078550 1.0kb upstream 1.0kb upstream 1000 false chr3: 35381138-35382137 Medicago truncatula
Medtr3g078550 1.0kb downstream 1.0kb downstream 5684 true chr3: 35382138-35387821 Medicago truncatula
Medtr3g078550 1.0kb downstream 1.0kb downstream 1000 false chr3: 35386822-35387821 Medicago truncatula
Medtr3g078550 2.0kb upstream 2.0kb upstream 6684 true chr3: 35380138-35386821 Medicago truncatula
Medtr3g078550 2.0kb upstream 2.0kb upstream 2000 false chr3: 35380138-35382137 Medicago truncatula
Medtr3g078550 2.0kb downstream 2.0kb downstream 6684 true chr3: 35382138-35388821 Medicago truncatula
Medtr3g078550 2.0kb downstream 2.0kb downstream 2000 false chr3: 35386822-35388821 Medicago truncatula
Medtr3g078550 5.0kb upstream 5.0kb upstream 9684 true chr3: 35377138-35386821 Medicago truncatula
Medtr3g078550 5.0kb upstream 5.0kb upstream 5000 false chr3: 35377138-35382137 Medicago truncatula
Medtr3g078550 5.0kb downstream 5.0kb downstream 9684 true chr3: 35382138-35391821 Medicago truncatula
Medtr3g078550 5.0kb downstream 5.0kb downstream 5000 false chr3: 35386822-35391821 Medicago truncatula
Medtr3g078550 10.0kb upstream 10.0kb upstream 14684 true chr3: 35372138-35386821 Medicago truncatula
Medtr3g078550 10.0kb upstream 10.0kb upstream 10000 false chr3: 35372138-35382137 Medicago truncatula
Medtr3g078550 10.0kb downstream 10.0kb downstream 14684 true chr3: 35382138-35396821 Medicago truncatula
Medtr3g078550 10.0kb downstream 10.0kb downstream 10000 false chr3: 35386822-35396821 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310378 5265 Fabidae View MSA
124063957 5270 Rosid View MSA
123742074 5271 Pentapetalae View MSA
122792963 5272 Eudicot View MSA
122042877 5273 Angiosperm View MSA
121345365 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.037        
cufflinks 0.423        
cufflinks 0.28       Low
cufflinks 1.72        
cufflinks 0.212       Low
cufflinks 1.713        
cufflinks 5.071       High
cufflinks 0.292        
cufflinks 6.601       High

0 Strain