Gene : Medtr3g079820 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF11347 - Protein of unknown function (DUF3148) (DUF3148) Description:  DUF3148 family protein
Genomic Order:  4065 Name:  ? Medtr3g079820
Secondary Identifier:  ? PAC:31059577
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g079820 0.5kb upstream 0.5kb upstream 1260 true chr3: 36038405-36039664 Medicago truncatula
Medtr3g079820 0.5kb upstream 0.5kb upstream 500 false chr3: 36039165-36039664 Medicago truncatula
Medtr3g079820 0.5kb downstream 0.5kb downstream 1260 true chr3: 36037905-36039164 Medicago truncatula
Medtr3g079820 0.5kb downstream 0.5kb downstream 500 false chr3: 36037905-36038404 Medicago truncatula
Medtr3g079820 1.0kb upstream 1.0kb upstream 1760 true chr3: 36038405-36040164 Medicago truncatula
Medtr3g079820 1.0kb upstream 1.0kb upstream 1000 false chr3: 36039165-36040164 Medicago truncatula
Medtr3g079820 1.0kb downstream 1.0kb downstream 1760 true chr3: 36037405-36039164 Medicago truncatula
Medtr3g079820 1.0kb downstream 1.0kb downstream 1000 false chr3: 36037405-36038404 Medicago truncatula
Medtr3g079820 2.0kb upstream 2.0kb upstream 2760 true chr3: 36038405-36041164 Medicago truncatula
Medtr3g079820 2.0kb upstream 2.0kb upstream 2000 false chr3: 36039165-36041164 Medicago truncatula
Medtr3g079820 2.0kb downstream 2.0kb downstream 2760 true chr3: 36036405-36039164 Medicago truncatula
Medtr3g079820 2.0kb downstream 2.0kb downstream 2000 false chr3: 36036405-36038404 Medicago truncatula
Medtr3g079820 5.0kb upstream 5.0kb upstream 5760 true chr3: 36038405-36044164 Medicago truncatula
Medtr3g079820 5.0kb upstream 5.0kb upstream 5000 false chr3: 36039165-36044164 Medicago truncatula
Medtr3g079820 5.0kb downstream 5.0kb downstream 5760 true chr3: 36033405-36039164 Medicago truncatula
Medtr3g079820 5.0kb downstream 5.0kb downstream 5000 false chr3: 36033405-36038404 Medicago truncatula
Medtr3g079820 10.0kb upstream 10.0kb upstream 10760 true chr3: 36038405-36049164 Medicago truncatula
Medtr3g079820 10.0kb upstream 10.0kb upstream 10000 false chr3: 36039165-36049164 Medicago truncatula
Medtr3g079820 10.0kb downstream 10.0kb downstream 10760 true chr3: 36028405-36039164 Medicago truncatula
Medtr3g079820 10.0kb downstream 10.0kb downstream 10000 false chr3: 36028405-36038404 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300714 5265 Fabidae View MSA
124063513 5270 Rosid View MSA
123741843 5271 Pentapetalae View MSA
122795737 5272 Eudicot View MSA
122044636 5273 Angiosperm View MSA
121348938 5274 Embryophyte View MSA
123381087 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.312       Low
cufflinks 7.17        
cufflinks 10.656     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 27.428     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 12.742     High  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain