Gene : Medtr3g079680 M. truncatula Mt4.0v1
Defline:  (1 of 4) K02892 - large subunit ribosomal protein L23 (RP-L23, MRPL23, rplW) Description:  ribosomal protein L23 family protein, putative
Genomic Order:  4053 Name:  ? Medtr3g079680
Secondary Identifier:  ? PAC:31059546
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g079680 0.5kb upstream 0.5kb upstream 1802 true chr3: 35958904-35960705 Medicago truncatula
Medtr3g079680 0.5kb upstream 0.5kb upstream 500 false chr3: 35960206-35960705 Medicago truncatula
Medtr3g079680 0.5kb downstream 0.5kb downstream 1802 true chr3: 35958404-35960205 Medicago truncatula
Medtr3g079680 0.5kb downstream 0.5kb downstream 500 false chr3: 35958404-35958903 Medicago truncatula
Medtr3g079680 1.0kb upstream 1.0kb upstream 2302 true chr3: 35958904-35961205 Medicago truncatula
Medtr3g079680 1.0kb upstream 1.0kb upstream 1000 false chr3: 35960206-35961205 Medicago truncatula
Medtr3g079680 1.0kb downstream 1.0kb downstream 2302 true chr3: 35957904-35960205 Medicago truncatula
Medtr3g079680 1.0kb downstream 1.0kb downstream 1000 false chr3: 35957904-35958903 Medicago truncatula
Medtr3g079680 2.0kb upstream 2.0kb upstream 3302 true chr3: 35958904-35962205 Medicago truncatula
Medtr3g079680 2.0kb upstream 2.0kb upstream 2000 false chr3: 35960206-35962205 Medicago truncatula
Medtr3g079680 2.0kb downstream 2.0kb downstream 3302 true chr3: 35956904-35960205 Medicago truncatula
Medtr3g079680 2.0kb downstream 2.0kb downstream 2000 false chr3: 35956904-35958903 Medicago truncatula
Medtr3g079680 5.0kb upstream 5.0kb upstream 6302 true chr3: 35958904-35965205 Medicago truncatula
Medtr3g079680 5.0kb upstream 5.0kb upstream 5000 false chr3: 35960206-35965205 Medicago truncatula
Medtr3g079680 5.0kb downstream 5.0kb downstream 6302 true chr3: 35953904-35960205 Medicago truncatula
Medtr3g079680 5.0kb downstream 5.0kb downstream 5000 false chr3: 35953904-35958903 Medicago truncatula
Medtr3g079680 10.0kb upstream 10.0kb upstream 11302 true chr3: 35958904-35970205 Medicago truncatula
Medtr3g079680 10.0kb upstream 10.0kb upstream 10000 false chr3: 35960206-35970205 Medicago truncatula
Medtr3g079680 10.0kb downstream 10.0kb downstream 11302 true chr3: 35948904-35960205 Medicago truncatula
Medtr3g079680 10.0kb downstream 10.0kb downstream 10000 false chr3: 35948904-35958903 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299568 5265 Fabidae View MSA
124068912 5270 Rosid View MSA
123740865 5271 Pentapetalae View MSA
122789044 5272 Eudicot View MSA
122044444 5273 Angiosperm View MSA
121349805 5274 Embryophyte View MSA
123426659 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.077        
cufflinks 2.198        
cufflinks 4.183       High
cufflinks 1.332        
cufflinks 4.096       High
cufflinks 0.348       Low
cufflinks 1.289        
cufflinks 2.976        
cufflinks 0.911        

0 Strain