Gene : Medtr3g079330 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21499:SF33 - HOMOSERINE DEHYDROGENASE Description:  homoserine dehydrogenase
Genomic Order:  4021 Name:  ? Medtr3g079330
Secondary Identifier:  ? PAC:31057155
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula HOMOSERSYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3001 Medicago truncatula pathologic  
Mtruncatula PWY-724 Medicago truncatula pathologic  
Mtruncatula THRESYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g079330 0.5kb upstream 0.5kb upstream 4922 true chr3: 35674034-35678955 Medicago truncatula
Medtr3g079330 0.5kb upstream 0.5kb upstream 500 false chr3: 35678456-35678955 Medicago truncatula
Medtr3g079330 0.5kb downstream 0.5kb downstream 4922 true chr3: 35673534-35678455 Medicago truncatula
Medtr3g079330 0.5kb downstream 0.5kb downstream 500 false chr3: 35673534-35674033 Medicago truncatula
Medtr3g079330 1.0kb upstream 1.0kb upstream 5422 true chr3: 35674034-35679455 Medicago truncatula
Medtr3g079330 1.0kb upstream 1.0kb upstream 1000 false chr3: 35678456-35679455 Medicago truncatula
Medtr3g079330 1.0kb downstream 1.0kb downstream 5422 true chr3: 35673034-35678455 Medicago truncatula
Medtr3g079330 1.0kb downstream 1.0kb downstream 1000 false chr3: 35673034-35674033 Medicago truncatula
Medtr3g079330 2.0kb upstream 2.0kb upstream 6422 true chr3: 35674034-35680455 Medicago truncatula
Medtr3g079330 2.0kb upstream 2.0kb upstream 2000 false chr3: 35678456-35680455 Medicago truncatula
Medtr3g079330 2.0kb downstream 2.0kb downstream 6422 true chr3: 35672034-35678455 Medicago truncatula
Medtr3g079330 2.0kb downstream 2.0kb downstream 2000 false chr3: 35672034-35674033 Medicago truncatula
Medtr3g079330 5.0kb upstream 5.0kb upstream 9422 true chr3: 35674034-35683455 Medicago truncatula
Medtr3g079330 5.0kb upstream 5.0kb upstream 5000 false chr3: 35678456-35683455 Medicago truncatula
Medtr3g079330 5.0kb downstream 5.0kb downstream 9422 true chr3: 35669034-35678455 Medicago truncatula
Medtr3g079330 5.0kb downstream 5.0kb downstream 5000 false chr3: 35669034-35674033 Medicago truncatula
Medtr3g079330 10.0kb upstream 10.0kb upstream 14422 true chr3: 35674034-35688455 Medicago truncatula
Medtr3g079330 10.0kb upstream 10.0kb upstream 10000 false chr3: 35678456-35688455 Medicago truncatula
Medtr3g079330 10.0kb downstream 10.0kb downstream 14422 true chr3: 35664034-35678455 Medicago truncatula
Medtr3g079330 10.0kb downstream 10.0kb downstream 10000 false chr3: 35664034-35674033 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305491 5265 Fabidae View MSA
124062775 5270 Rosid View MSA
123740432 5271 Pentapetalae View MSA
122769980 5272 Eudicot View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.831        
cufflinks 0.741        
cufflinks 0.681        
cufflinks 0.307        
cufflinks 1.654        
cufflinks 0.028     Low Low
cufflinks 0.704        
cufflinks 0.588        
cufflinks 1.336        

0 Strain