Gene : Medtr3g079520 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23308//PTHR23308:SF29 - NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 Description:  smad/FHA domain protein
Genomic Order:  4039 Name:  ? Medtr3g079520
Secondary Identifier:  ? PAC:31059099
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g079520 0.5kb upstream 0.5kb upstream 2113 true chr3: 35896335-35898447 Medicago truncatula
Medtr3g079520 0.5kb upstream 0.5kb upstream 500 false chr3: 35897948-35898447 Medicago truncatula
Medtr3g079520 0.5kb downstream 0.5kb downstream 2113 true chr3: 35895835-35897947 Medicago truncatula
Medtr3g079520 0.5kb downstream 0.5kb downstream 500 false chr3: 35895835-35896334 Medicago truncatula
Medtr3g079520 1.0kb upstream 1.0kb upstream 2613 true chr3: 35896335-35898947 Medicago truncatula
Medtr3g079520 1.0kb upstream 1.0kb upstream 1000 false chr3: 35897948-35898947 Medicago truncatula
Medtr3g079520 1.0kb downstream 1.0kb downstream 2613 true chr3: 35895335-35897947 Medicago truncatula
Medtr3g079520 1.0kb downstream 1.0kb downstream 1000 false chr3: 35895335-35896334 Medicago truncatula
Medtr3g079520 2.0kb upstream 2.0kb upstream 3613 true chr3: 35896335-35899947 Medicago truncatula
Medtr3g079520 2.0kb upstream 2.0kb upstream 2000 false chr3: 35897948-35899947 Medicago truncatula
Medtr3g079520 2.0kb downstream 2.0kb downstream 3613 true chr3: 35894335-35897947 Medicago truncatula
Medtr3g079520 2.0kb downstream 2.0kb downstream 2000 false chr3: 35894335-35896334 Medicago truncatula
Medtr3g079520 5.0kb upstream 5.0kb upstream 6613 true chr3: 35896335-35902947 Medicago truncatula
Medtr3g079520 5.0kb upstream 5.0kb upstream 5000 false chr3: 35897948-35902947 Medicago truncatula
Medtr3g079520 5.0kb downstream 5.0kb downstream 6613 true chr3: 35891335-35897947 Medicago truncatula
Medtr3g079520 5.0kb downstream 5.0kb downstream 5000 false chr3: 35891335-35896334 Medicago truncatula
Medtr3g079520 10.0kb upstream 10.0kb upstream 11613 true chr3: 35896335-35907947 Medicago truncatula
Medtr3g079520 10.0kb upstream 10.0kb upstream 10000 false chr3: 35897948-35907947 Medicago truncatula
Medtr3g079520 10.0kb downstream 10.0kb downstream 11613 true chr3: 35886335-35897947 Medicago truncatula
Medtr3g079520 10.0kb downstream 10.0kb downstream 10000 false chr3: 35886335-35896334 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310236 5265 Fabidae View MSA
124060596 5270 Rosid View MSA
123741066 5271 Pentapetalae View MSA
122770002 5272 Eudicot View MSA
122042553 5273 Angiosperm View MSA
121344574 5274 Embryophyte View MSA
123426095 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain