Gene : Medtr3g080500 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10638:SF39 - AMINE OXIDASE-RELATED Description:  copper amine oxidase, enzyme domain protein
Genomic Order:  4123 Name:  ? Medtr3g080500
Secondary Identifier:  ? PAC:31061303
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g080500 0.5kb upstream 0.5kb upstream 6117 true chr3: 36420175-36426291 Medicago truncatula
Medtr3g080500 0.5kb upstream 0.5kb upstream 500 false chr3: 36420175-36420674 Medicago truncatula
Medtr3g080500 0.5kb downstream 0.5kb downstream 6117 true chr3: 36420675-36426791 Medicago truncatula
Medtr3g080500 0.5kb downstream 0.5kb downstream 500 false chr3: 36426292-36426791 Medicago truncatula
Medtr3g080500 1.0kb upstream 1.0kb upstream 6617 true chr3: 36419675-36426291 Medicago truncatula
Medtr3g080500 1.0kb upstream 1.0kb upstream 1000 false chr3: 36419675-36420674 Medicago truncatula
Medtr3g080500 1.0kb downstream 1.0kb downstream 6617 true chr3: 36420675-36427291 Medicago truncatula
Medtr3g080500 1.0kb downstream 1.0kb downstream 1000 false chr3: 36426292-36427291 Medicago truncatula
Medtr3g080500 2.0kb upstream 2.0kb upstream 7617 true chr3: 36418675-36426291 Medicago truncatula
Medtr3g080500 2.0kb upstream 2.0kb upstream 2000 false chr3: 36418675-36420674 Medicago truncatula
Medtr3g080500 2.0kb downstream 2.0kb downstream 7617 true chr3: 36420675-36428291 Medicago truncatula
Medtr3g080500 2.0kb downstream 2.0kb downstream 2000 false chr3: 36426292-36428291 Medicago truncatula
Medtr3g080500 5.0kb upstream 5.0kb upstream 10617 true chr3: 36415675-36426291 Medicago truncatula
Medtr3g080500 5.0kb upstream 5.0kb upstream 5000 false chr3: 36415675-36420674 Medicago truncatula
Medtr3g080500 5.0kb downstream 5.0kb downstream 10617 true chr3: 36420675-36431291 Medicago truncatula
Medtr3g080500 5.0kb downstream 5.0kb downstream 5000 false chr3: 36426292-36431291 Medicago truncatula
Medtr3g080500 10.0kb upstream 10.0kb upstream 15617 true chr3: 36410675-36426291 Medicago truncatula
Medtr3g080500 10.0kb upstream 10.0kb upstream 10000 false chr3: 36410675-36420674 Medicago truncatula
Medtr3g080500 10.0kb downstream 10.0kb downstream 15617 true chr3: 36420675-36436291 Medicago truncatula
Medtr3g080500 10.0kb downstream 10.0kb downstream 10000 false chr3: 36426292-36436291 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308894 5265 Fabidae View MSA
124066432 5270 Rosid View MSA
123751770 5271 Pentapetalae View MSA
122795506 5272 Eudicot View MSA
122049910 5273 Angiosperm View MSA
123428923 5275 Viridiplantae View MSA
121349913 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.21     High High
cufflinks 7.254        
cufflinks 4.641        
cufflinks 1.483       Low
cufflinks 6.157        
cufflinks 1.043       Low
cufflinks 3.502        
cufflinks 4.519        
cufflinks 4.883        

0 Strain