Gene : Medtr3g080490 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22951:SF26 - CLATHRIN COAT ASSEMBLY PROTEIN AP180 Description:  clathrin assembly protein
Genomic Order:  4122 Name:  ? Medtr3g080490
Secondary Identifier:  ? PAC:31056285
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g080490 0.5kb upstream 0.5kb upstream 3296 true chr3: 36413839-36417134 Medicago truncatula
Medtr3g080490 0.5kb upstream 0.5kb upstream 500 false chr3: 36416635-36417134 Medicago truncatula
Medtr3g080490 0.5kb downstream 0.5kb downstream 3296 true chr3: 36413339-36416634 Medicago truncatula
Medtr3g080490 0.5kb downstream 0.5kb downstream 500 false chr3: 36413339-36413838 Medicago truncatula
Medtr3g080490 1.0kb upstream 1.0kb upstream 3796 true chr3: 36413839-36417634 Medicago truncatula
Medtr3g080490 1.0kb upstream 1.0kb upstream 1000 false chr3: 36416635-36417634 Medicago truncatula
Medtr3g080490 1.0kb downstream 1.0kb downstream 3796 true chr3: 36412839-36416634 Medicago truncatula
Medtr3g080490 1.0kb downstream 1.0kb downstream 1000 false chr3: 36412839-36413838 Medicago truncatula
Medtr3g080490 2.0kb upstream 2.0kb upstream 4796 true chr3: 36413839-36418634 Medicago truncatula
Medtr3g080490 2.0kb upstream 2.0kb upstream 2000 false chr3: 36416635-36418634 Medicago truncatula
Medtr3g080490 2.0kb downstream 2.0kb downstream 4796 true chr3: 36411839-36416634 Medicago truncatula
Medtr3g080490 2.0kb downstream 2.0kb downstream 2000 false chr3: 36411839-36413838 Medicago truncatula
Medtr3g080490 5.0kb upstream 5.0kb upstream 7796 true chr3: 36413839-36421634 Medicago truncatula
Medtr3g080490 5.0kb upstream 5.0kb upstream 5000 false chr3: 36416635-36421634 Medicago truncatula
Medtr3g080490 5.0kb downstream 5.0kb downstream 7796 true chr3: 36408839-36416634 Medicago truncatula
Medtr3g080490 5.0kb downstream 5.0kb downstream 5000 false chr3: 36408839-36413838 Medicago truncatula
Medtr3g080490 10.0kb upstream 10.0kb upstream 12796 true chr3: 36413839-36426634 Medicago truncatula
Medtr3g080490 10.0kb upstream 10.0kb upstream 10000 false chr3: 36416635-36426634 Medicago truncatula
Medtr3g080490 10.0kb downstream 10.0kb downstream 12796 true chr3: 36403839-36416634 Medicago truncatula
Medtr3g080490 10.0kb downstream 10.0kb downstream 10000 false chr3: 36403839-36413838 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299561 5265 Fabidae View MSA
124064845 5270 Rosid View MSA
123748720 5271 Pentapetalae View MSA
122791986 5272 Eudicot View MSA
122050883 5273 Angiosperm View MSA
121351758 5274 Embryophyte View MSA
123382309 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain