Gene : Medtr3g080390 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11119:SF46 - NUCLEOBASE-ASCORBATE TRANSPORTER 1 Description:  nucleobase-ascorbate transporter-like protein
Genomic Order:  4112 Name:  ? Medtr3g080390
Secondary Identifier:  ? PAC:31053473
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g080390 0.5kb upstream 0.5kb upstream 6613 true chr3: 36346396-36353008 Medicago truncatula
Medtr3g080390 0.5kb upstream 0.5kb upstream 500 false chr3: 36346396-36346895 Medicago truncatula
Medtr3g080390 0.5kb downstream 0.5kb downstream 6613 true chr3: 36346896-36353508 Medicago truncatula
Medtr3g080390 0.5kb downstream 0.5kb downstream 500 false chr3: 36353009-36353508 Medicago truncatula
Medtr3g080390 1.0kb upstream 1.0kb upstream 7113 true chr3: 36345896-36353008 Medicago truncatula
Medtr3g080390 1.0kb upstream 1.0kb upstream 1000 false chr3: 36345896-36346895 Medicago truncatula
Medtr3g080390 1.0kb downstream 1.0kb downstream 7113 true chr3: 36346896-36354008 Medicago truncatula
Medtr3g080390 1.0kb downstream 1.0kb downstream 1000 false chr3: 36353009-36354008 Medicago truncatula
Medtr3g080390 2.0kb upstream 2.0kb upstream 8113 true chr3: 36344896-36353008 Medicago truncatula
Medtr3g080390 2.0kb upstream 2.0kb upstream 2000 false chr3: 36344896-36346895 Medicago truncatula
Medtr3g080390 2.0kb downstream 2.0kb downstream 8113 true chr3: 36346896-36355008 Medicago truncatula
Medtr3g080390 2.0kb downstream 2.0kb downstream 2000 false chr3: 36353009-36355008 Medicago truncatula
Medtr3g080390 5.0kb upstream 5.0kb upstream 11113 true chr3: 36341896-36353008 Medicago truncatula
Medtr3g080390 5.0kb upstream 5.0kb upstream 5000 false chr3: 36341896-36346895 Medicago truncatula
Medtr3g080390 5.0kb downstream 5.0kb downstream 11113 true chr3: 36346896-36358008 Medicago truncatula
Medtr3g080390 5.0kb downstream 5.0kb downstream 5000 false chr3: 36353009-36358008 Medicago truncatula
Medtr3g080390 10.0kb upstream 10.0kb upstream 16113 true chr3: 36336896-36353008 Medicago truncatula
Medtr3g080390 10.0kb upstream 10.0kb upstream 10000 false chr3: 36336896-36346895 Medicago truncatula
Medtr3g080390 10.0kb downstream 10.0kb downstream 16113 true chr3: 36346896-36363008 Medicago truncatula
Medtr3g080390 10.0kb downstream 10.0kb downstream 10000 false chr3: 36353009-36363008 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303688 5265 Fabidae View MSA
124067921 5270 Rosid View MSA
123749594 5271 Pentapetalae View MSA
122792857 5272 Eudicot View MSA
122044330 5273 Angiosperm View MSA
121348988 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.248        
cufflinks 0.236        
cufflinks 0.238        
cufflinks 0.065     Low Low
cufflinks 0.223        
cufflinks 0.328        
cufflinks 0.381        
cufflinks 0.231        
cufflinks 0.353        

0 Strain