Gene : Medtr3g080170 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR27001:SF183 - PROTEIN LYK5 Description:  LysM type receptor kinase
Genomic Order:  4094 Name:  ? Medtr3g080170
Secondary Identifier:  ? PAC:31060983
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g080170 0.5kb upstream 0.5kb upstream 2471 true chr3: 36262263-36264733 Medicago truncatula
Medtr3g080170 0.5kb upstream 0.5kb upstream 500 false chr3: 36264234-36264733 Medicago truncatula
Medtr3g080170 0.5kb downstream 0.5kb downstream 2471 true chr3: 36261763-36264233 Medicago truncatula
Medtr3g080170 0.5kb downstream 0.5kb downstream 500 false chr3: 36261763-36262262 Medicago truncatula
Medtr3g080170 1.0kb upstream 1.0kb upstream 2971 true chr3: 36262263-36265233 Medicago truncatula
Medtr3g080170 1.0kb upstream 1.0kb upstream 1000 false chr3: 36264234-36265233 Medicago truncatula
Medtr3g080170 1.0kb downstream 1.0kb downstream 2971 true chr3: 36261263-36264233 Medicago truncatula
Medtr3g080170 1.0kb downstream 1.0kb downstream 1000 false chr3: 36261263-36262262 Medicago truncatula
Medtr3g080170 2.0kb upstream 2.0kb upstream 3971 true chr3: 36262263-36266233 Medicago truncatula
Medtr3g080170 2.0kb upstream 2.0kb upstream 2000 false chr3: 36264234-36266233 Medicago truncatula
Medtr3g080170 2.0kb downstream 2.0kb downstream 3971 true chr3: 36260263-36264233 Medicago truncatula
Medtr3g080170 2.0kb downstream 2.0kb downstream 2000 false chr3: 36260263-36262262 Medicago truncatula
Medtr3g080170 5.0kb upstream 5.0kb upstream 6971 true chr3: 36262263-36269233 Medicago truncatula
Medtr3g080170 5.0kb upstream 5.0kb upstream 5000 false chr3: 36264234-36269233 Medicago truncatula
Medtr3g080170 5.0kb downstream 5.0kb downstream 6971 true chr3: 36257263-36264233 Medicago truncatula
Medtr3g080170 5.0kb downstream 5.0kb downstream 5000 false chr3: 36257263-36262262 Medicago truncatula
Medtr3g080170 10.0kb upstream 10.0kb upstream 11971 true chr3: 36262263-36274233 Medicago truncatula
Medtr3g080170 10.0kb upstream 10.0kb upstream 10000 false chr3: 36264234-36274233 Medicago truncatula
Medtr3g080170 10.0kb downstream 10.0kb downstream 11971 true chr3: 36252263-36264233 Medicago truncatula
Medtr3g080170 10.0kb downstream 10.0kb downstream 10000 false chr3: 36252263-36262262 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122288905 5265 Fabidae View MSA
124039336 5270 Rosid View MSA
123753390 5271 Pentapetalae View MSA
122790580 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.419        
cufflinks 0.625        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.614        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.195       Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain