Gene : Medtr3g081150 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12419//PTHR12419:SF6 - OTU DOMAIN CONTAINING PROTEIN Description:  cysteine proteinase superfamily protein
Genomic Order:  4174 Name:  ? Medtr3g081150
Secondary Identifier:  ? PAC:31058107
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g081150 0.5kb upstream 0.5kb upstream 5509 true chr3: 36755711-36761219 Medicago truncatula
Medtr3g081150 0.5kb upstream 0.5kb upstream 500 false chr3: 36755711-36756210 Medicago truncatula
Medtr3g081150 0.5kb downstream 0.5kb downstream 5509 true chr3: 36756211-36761719 Medicago truncatula
Medtr3g081150 0.5kb downstream 0.5kb downstream 500 false chr3: 36761220-36761719 Medicago truncatula
Medtr3g081150 1.0kb upstream 1.0kb upstream 6009 true chr3: 36755211-36761219 Medicago truncatula
Medtr3g081150 1.0kb upstream 1.0kb upstream 1000 false chr3: 36755211-36756210 Medicago truncatula
Medtr3g081150 1.0kb downstream 1.0kb downstream 6009 true chr3: 36756211-36762219 Medicago truncatula
Medtr3g081150 1.0kb downstream 1.0kb downstream 1000 false chr3: 36761220-36762219 Medicago truncatula
Medtr3g081150 2.0kb upstream 2.0kb upstream 7009 true chr3: 36754211-36761219 Medicago truncatula
Medtr3g081150 2.0kb upstream 2.0kb upstream 2000 false chr3: 36754211-36756210 Medicago truncatula
Medtr3g081150 2.0kb downstream 2.0kb downstream 7009 true chr3: 36756211-36763219 Medicago truncatula
Medtr3g081150 2.0kb downstream 2.0kb downstream 2000 false chr3: 36761220-36763219 Medicago truncatula
Medtr3g081150 5.0kb upstream 5.0kb upstream 10009 true chr3: 36751211-36761219 Medicago truncatula
Medtr3g081150 5.0kb upstream 5.0kb upstream 5000 false chr3: 36751211-36756210 Medicago truncatula
Medtr3g081150 5.0kb downstream 5.0kb downstream 10009 true chr3: 36756211-36766219 Medicago truncatula
Medtr3g081150 5.0kb downstream 5.0kb downstream 5000 false chr3: 36761220-36766219 Medicago truncatula
Medtr3g081150 10.0kb upstream 10.0kb upstream 15009 true chr3: 36746211-36761219 Medicago truncatula
Medtr3g081150 10.0kb upstream 10.0kb upstream 10000 false chr3: 36746211-36756210 Medicago truncatula
Medtr3g081150 10.0kb downstream 10.0kb downstream 15009 true chr3: 36756211-36771219 Medicago truncatula
Medtr3g081150 10.0kb downstream 10.0kb downstream 10000 false chr3: 36761220-36771219 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300066 5265 Fabidae View MSA
124068845 5270 Rosid View MSA
123751936 5271 Pentapetalae View MSA
122788372 5272 Eudicot View MSA
122048999 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.049       High
cufflinks 3.173        
cufflinks 6.122       High
cufflinks 1.098       Low
cufflinks 1.537        
cufflinks 2.254        
cufflinks 4.284        
cufflinks 3.821        
cufflinks 1.627        

0 Strain