Gene : Medtr3g081180 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12303:SF6 - UPF0586 PROTEIN C9ORF41 Description:  UPF0586 C9orf41-like protein
Genomic Order:  4176 Name:  ? Medtr3g081180
Secondary Identifier:  ? PAC:31057554
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g081180 0.5kb upstream 0.5kb upstream 10681 true chr3: 36773699-36784379 Medicago truncatula
Medtr3g081180 0.5kb upstream 0.5kb upstream 500 false chr3: 36783880-36784379 Medicago truncatula
Medtr3g081180 0.5kb downstream 0.5kb downstream 10681 true chr3: 36773199-36783879 Medicago truncatula
Medtr3g081180 0.5kb downstream 0.5kb downstream 500 false chr3: 36773199-36773698 Medicago truncatula
Medtr3g081180 1.0kb upstream 1.0kb upstream 11181 true chr3: 36773699-36784879 Medicago truncatula
Medtr3g081180 1.0kb upstream 1.0kb upstream 1000 false chr3: 36783880-36784879 Medicago truncatula
Medtr3g081180 1.0kb downstream 1.0kb downstream 11181 true chr3: 36772699-36783879 Medicago truncatula
Medtr3g081180 1.0kb downstream 1.0kb downstream 1000 false chr3: 36772699-36773698 Medicago truncatula
Medtr3g081180 2.0kb upstream 2.0kb upstream 12181 true chr3: 36773699-36785879 Medicago truncatula
Medtr3g081180 2.0kb upstream 2.0kb upstream 2000 false chr3: 36783880-36785879 Medicago truncatula
Medtr3g081180 2.0kb downstream 2.0kb downstream 12181 true chr3: 36771699-36783879 Medicago truncatula
Medtr3g081180 2.0kb downstream 2.0kb downstream 2000 false chr3: 36771699-36773698 Medicago truncatula
Medtr3g081180 5.0kb upstream 5.0kb upstream 15181 true chr3: 36773699-36788879 Medicago truncatula
Medtr3g081180 5.0kb upstream 5.0kb upstream 5000 false chr3: 36783880-36788879 Medicago truncatula
Medtr3g081180 5.0kb downstream 5.0kb downstream 15181 true chr3: 36768699-36783879 Medicago truncatula
Medtr3g081180 5.0kb downstream 5.0kb downstream 5000 false chr3: 36768699-36773698 Medicago truncatula
Medtr3g081180 10.0kb upstream 10.0kb upstream 20181 true chr3: 36773699-36793879 Medicago truncatula
Medtr3g081180 10.0kb upstream 10.0kb upstream 10000 false chr3: 36783880-36793879 Medicago truncatula
Medtr3g081180 10.0kb downstream 10.0kb downstream 20181 true chr3: 36763699-36783879 Medicago truncatula
Medtr3g081180 10.0kb downstream 10.0kb downstream 10000 false chr3: 36763699-36773698 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304958 5265 Fabidae View MSA
124060622 5270 Rosid View MSA
123739878 5271 Pentapetalae View MSA
122791925 5272 Eudicot View MSA
122046455 5273 Angiosperm View MSA
121344322 5274 Embryophyte View MSA
123425361 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.274        
cufflinks 0.208        
cufflinks 0.299        
cufflinks 0.106       Low
cufflinks 0.328        
cufflinks 0.222        
cufflinks 0.301        
cufflinks 0.246        
cufflinks 0.234        

0 Strain