Gene : Medtr3g082140 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10766:SF44 - ENDOMEMBRANE FAMILY PROTEIN 70 Description:  transmembrane 9 family protein
Genomic Order:  4224 Name:  ? Medtr3g082140
Secondary Identifier:  ? PAC:31060238
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g082140 0.5kb upstream 0.5kb upstream 4745 true chr3: 37068025-37072769 Medicago truncatula
Medtr3g082140 0.5kb upstream 0.5kb upstream 500 false chr3: 37068025-37068524 Medicago truncatula
Medtr3g082140 0.5kb downstream 0.5kb downstream 4745 true chr3: 37068525-37073269 Medicago truncatula
Medtr3g082140 0.5kb downstream 0.5kb downstream 500 false chr3: 37072770-37073269 Medicago truncatula
Medtr3g082140 1.0kb upstream 1.0kb upstream 5245 true chr3: 37067525-37072769 Medicago truncatula
Medtr3g082140 1.0kb upstream 1.0kb upstream 1000 false chr3: 37067525-37068524 Medicago truncatula
Medtr3g082140 1.0kb downstream 1.0kb downstream 5245 true chr3: 37068525-37073769 Medicago truncatula
Medtr3g082140 1.0kb downstream 1.0kb downstream 1000 false chr3: 37072770-37073769 Medicago truncatula
Medtr3g082140 2.0kb upstream 2.0kb upstream 6245 true chr3: 37066525-37072769 Medicago truncatula
Medtr3g082140 2.0kb upstream 2.0kb upstream 2000 false chr3: 37066525-37068524 Medicago truncatula
Medtr3g082140 2.0kb downstream 2.0kb downstream 6245 true chr3: 37068525-37074769 Medicago truncatula
Medtr3g082140 2.0kb downstream 2.0kb downstream 2000 false chr3: 37072770-37074769 Medicago truncatula
Medtr3g082140 5.0kb upstream 5.0kb upstream 9245 true chr3: 37063525-37072769 Medicago truncatula
Medtr3g082140 5.0kb upstream 5.0kb upstream 5000 false chr3: 37063525-37068524 Medicago truncatula
Medtr3g082140 5.0kb downstream 5.0kb downstream 9245 true chr3: 37068525-37077769 Medicago truncatula
Medtr3g082140 5.0kb downstream 5.0kb downstream 5000 false chr3: 37072770-37077769 Medicago truncatula
Medtr3g082140 10.0kb upstream 10.0kb upstream 14245 true chr3: 37058525-37072769 Medicago truncatula
Medtr3g082140 10.0kb upstream 10.0kb upstream 10000 false chr3: 37058525-37068524 Medicago truncatula
Medtr3g082140 10.0kb downstream 10.0kb downstream 14245 true chr3: 37068525-37082769 Medicago truncatula
Medtr3g082140 10.0kb downstream 10.0kb downstream 10000 false chr3: 37072770-37082769 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309439 5265 Fabidae View MSA
124062791 5270 Rosid View MSA
123741682 5271 Pentapetalae View MSA
122787007 5272 Eudicot View MSA
122044185 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.45        
cufflinks 14.518     High  
cufflinks 12.016     High  
cufflinks 9.22     High  
cufflinks 19.699     High High
cufflinks 4.681       Low
cufflinks 10.997     High  
cufflinks 11.315     High  
cufflinks 13.943     High  

0 Strain