Gene : Medtr3g082100 M. truncatula Mt4.0v1
Defline:  (1 of 16) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Description:  Lipid transfer protein
Genomic Order:  4221 Name:  ? Medtr3g082100
Secondary Identifier:  ? PAC:31053509
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g082100 0.5kb upstream 0.5kb upstream 2615 true chr3: 37046244-37048858 Medicago truncatula
Medtr3g082100 0.5kb upstream 0.5kb upstream 500 false chr3: 37046244-37046743 Medicago truncatula
Medtr3g082100 0.5kb downstream 0.5kb downstream 2615 true chr3: 37046744-37049358 Medicago truncatula
Medtr3g082100 0.5kb downstream 0.5kb downstream 500 false chr3: 37048859-37049358 Medicago truncatula
Medtr3g082100 1.0kb upstream 1.0kb upstream 3115 true chr3: 37045744-37048858 Medicago truncatula
Medtr3g082100 1.0kb upstream 1.0kb upstream 1000 false chr3: 37045744-37046743 Medicago truncatula
Medtr3g082100 1.0kb downstream 1.0kb downstream 3115 true chr3: 37046744-37049858 Medicago truncatula
Medtr3g082100 1.0kb downstream 1.0kb downstream 1000 false chr3: 37048859-37049858 Medicago truncatula
Medtr3g082100 2.0kb upstream 2.0kb upstream 4115 true chr3: 37044744-37048858 Medicago truncatula
Medtr3g082100 2.0kb upstream 2.0kb upstream 2000 false chr3: 37044744-37046743 Medicago truncatula
Medtr3g082100 2.0kb downstream 2.0kb downstream 4115 true chr3: 37046744-37050858 Medicago truncatula
Medtr3g082100 2.0kb downstream 2.0kb downstream 2000 false chr3: 37048859-37050858 Medicago truncatula
Medtr3g082100 5.0kb upstream 5.0kb upstream 7115 true chr3: 37041744-37048858 Medicago truncatula
Medtr3g082100 5.0kb upstream 5.0kb upstream 5000 false chr3: 37041744-37046743 Medicago truncatula
Medtr3g082100 5.0kb downstream 5.0kb downstream 7115 true chr3: 37046744-37053858 Medicago truncatula
Medtr3g082100 5.0kb downstream 5.0kb downstream 5000 false chr3: 37048859-37053858 Medicago truncatula
Medtr3g082100 10.0kb upstream 10.0kb upstream 12115 true chr3: 37036744-37048858 Medicago truncatula
Medtr3g082100 10.0kb upstream 10.0kb upstream 10000 false chr3: 37036744-37046743 Medicago truncatula
Medtr3g082100 10.0kb downstream 10.0kb downstream 12115 true chr3: 37046744-37058858 Medicago truncatula
Medtr3g082100 10.0kb downstream 10.0kb downstream 10000 false chr3: 37048859-37058858 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314397 5265 Fabidae View MSA
124070739 5270 Rosid View MSA
123753397 5271 Pentapetalae View MSA
122797404 5272 Eudicot View MSA
122050019 5273 Angiosperm View MSA
123429239 5275 Viridiplantae View MSA
121311688 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 378.386     High High
cufflinks 51.021     High  
cufflinks 37.636     High Low
cufflinks 365.225     High High
cufflinks 55.353     High  
cufflinks 155.466     High  
cufflinks 237.552     High  
cufflinks 31.879     High Low
cufflinks 402.655     High High

0 Strain