Gene : Medtr3g083180 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11451:SF32 - THREONYL-TRNA SYNTHETASE / THREONINE--TRNA LIGASE-RELATED Description:  threonyl-tRNA synthetase/threonine-tRNA ligase, putative
Genomic Order:  4292 Name:  ? Medtr3g083180
Secondary Identifier:  ? PAC:31058956
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula TRNA-CHARGING-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g083180 0.5kb upstream 0.5kb upstream 6078 true chr3: 37529329-37535406 Medicago truncatula
Medtr3g083180 0.5kb upstream 0.5kb upstream 500 false chr3: 37534907-37535406 Medicago truncatula
Medtr3g083180 0.5kb downstream 0.5kb downstream 6078 true chr3: 37528829-37534906 Medicago truncatula
Medtr3g083180 0.5kb downstream 0.5kb downstream 500 false chr3: 37528829-37529328 Medicago truncatula
Medtr3g083180 1.0kb upstream 1.0kb upstream 6578 true chr3: 37529329-37535906 Medicago truncatula
Medtr3g083180 1.0kb upstream 1.0kb upstream 1000 false chr3: 37534907-37535906 Medicago truncatula
Medtr3g083180 1.0kb downstream 1.0kb downstream 6578 true chr3: 37528329-37534906 Medicago truncatula
Medtr3g083180 1.0kb downstream 1.0kb downstream 1000 false chr3: 37528329-37529328 Medicago truncatula
Medtr3g083180 2.0kb upstream 2.0kb upstream 7578 true chr3: 37529329-37536906 Medicago truncatula
Medtr3g083180 2.0kb upstream 2.0kb upstream 2000 false chr3: 37534907-37536906 Medicago truncatula
Medtr3g083180 2.0kb downstream 2.0kb downstream 7578 true chr3: 37527329-37534906 Medicago truncatula
Medtr3g083180 2.0kb downstream 2.0kb downstream 2000 false chr3: 37527329-37529328 Medicago truncatula
Medtr3g083180 5.0kb upstream 5.0kb upstream 10578 true chr3: 37529329-37539906 Medicago truncatula
Medtr3g083180 5.0kb upstream 5.0kb upstream 5000 false chr3: 37534907-37539906 Medicago truncatula
Medtr3g083180 5.0kb downstream 5.0kb downstream 10578 true chr3: 37524329-37534906 Medicago truncatula
Medtr3g083180 5.0kb downstream 5.0kb downstream 5000 false chr3: 37524329-37529328 Medicago truncatula
Medtr3g083180 10.0kb upstream 10.0kb upstream 15578 true chr3: 37529329-37544906 Medicago truncatula
Medtr3g083180 10.0kb upstream 10.0kb upstream 10000 false chr3: 37534907-37544906 Medicago truncatula
Medtr3g083180 10.0kb downstream 10.0kb downstream 15578 true chr3: 37519329-37534906 Medicago truncatula
Medtr3g083180 10.0kb downstream 10.0kb downstream 10000 false chr3: 37519329-37529328 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300516 5265 Fabidae View MSA
124062778 5270 Rosid View MSA
123739350 5271 Pentapetalae View MSA
122793542 5272 Eudicot View MSA
122044606 5273 Angiosperm View MSA
121343894 5274 Embryophyte View MSA
123425201 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.31        
cufflinks 7.525       High
cufflinks 3.127        
cufflinks 0.152       Low
cufflinks 9.451       High
cufflinks 0.472        
cufflinks 0.46        
cufflinks 4.574        
cufflinks 0.551        

0 Strain