Gene : Medtr3g082840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23153//PTHR23153:SF36 - UBX-RELATED Description:  zinc metalloproteinase-like protein, putative
Genomic Order:  4273 Name:  ? Medtr3g082840
Secondary Identifier:  ? PAC:31055138
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g082840 0.5kb upstream 0.5kb upstream 6804 true chr3: 37388103-37394906 Medicago truncatula
Medtr3g082840 0.5kb upstream 0.5kb upstream 500 false chr3: 37388103-37388602 Medicago truncatula
Medtr3g082840 0.5kb downstream 0.5kb downstream 6804 true chr3: 37388603-37395406 Medicago truncatula
Medtr3g082840 0.5kb downstream 0.5kb downstream 500 false chr3: 37394907-37395406 Medicago truncatula
Medtr3g082840 1.0kb upstream 1.0kb upstream 7304 true chr3: 37387603-37394906 Medicago truncatula
Medtr3g082840 1.0kb upstream 1.0kb upstream 1000 false chr3: 37387603-37388602 Medicago truncatula
Medtr3g082840 1.0kb downstream 1.0kb downstream 7304 true chr3: 37388603-37395906 Medicago truncatula
Medtr3g082840 1.0kb downstream 1.0kb downstream 1000 false chr3: 37394907-37395906 Medicago truncatula
Medtr3g082840 2.0kb upstream 2.0kb upstream 8304 true chr3: 37386603-37394906 Medicago truncatula
Medtr3g082840 2.0kb upstream 2.0kb upstream 2000 false chr3: 37386603-37388602 Medicago truncatula
Medtr3g082840 2.0kb downstream 2.0kb downstream 8304 true chr3: 37388603-37396906 Medicago truncatula
Medtr3g082840 2.0kb downstream 2.0kb downstream 2000 false chr3: 37394907-37396906 Medicago truncatula
Medtr3g082840 5.0kb upstream 5.0kb upstream 11304 true chr3: 37383603-37394906 Medicago truncatula
Medtr3g082840 5.0kb upstream 5.0kb upstream 5000 false chr3: 37383603-37388602 Medicago truncatula
Medtr3g082840 5.0kb downstream 5.0kb downstream 11304 true chr3: 37388603-37399906 Medicago truncatula
Medtr3g082840 5.0kb downstream 5.0kb downstream 5000 false chr3: 37394907-37399906 Medicago truncatula
Medtr3g082840 10.0kb upstream 10.0kb upstream 16304 true chr3: 37378603-37394906 Medicago truncatula
Medtr3g082840 10.0kb upstream 10.0kb upstream 10000 false chr3: 37378603-37388602 Medicago truncatula
Medtr3g082840 10.0kb downstream 10.0kb downstream 16304 true chr3: 37388603-37404906 Medicago truncatula
Medtr3g082840 10.0kb downstream 10.0kb downstream 10000 false chr3: 37394907-37404906 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312339 5265 Fabidae View MSA
124067856 5270 Rosid View MSA
123736685 5271 Pentapetalae View MSA
122769874 5272 Eudicot View MSA
122045997 5273 Angiosperm View MSA
121345649 5274 Embryophyte View MSA
123425530 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.185       High
cufflinks 4.537        
cufflinks 3.541        
cufflinks 3.722        
cufflinks 2.627       Low
cufflinks 2.627       Low
cufflinks 8.482       High
cufflinks 3.538        
cufflinks 4.365        

0 Strain