Gene : Medtr3g082850 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF07889 - Protein of unknown function (DUF1664) (DUF1664) Description:  BZIP transcription factor
Genomic Order:  4274 Name:  ? Medtr3g082850
Secondary Identifier:  ? PAC:31060698
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g082850 0.5kb upstream 0.5kb upstream 4778 true chr3: 37395829-37400606 Medicago truncatula
Medtr3g082850 0.5kb upstream 0.5kb upstream 500 false chr3: 37395829-37396328 Medicago truncatula
Medtr3g082850 0.5kb downstream 0.5kb downstream 4778 true chr3: 37396329-37401106 Medicago truncatula
Medtr3g082850 0.5kb downstream 0.5kb downstream 500 false chr3: 37400607-37401106 Medicago truncatula
Medtr3g082850 1.0kb upstream 1.0kb upstream 5278 true chr3: 37395329-37400606 Medicago truncatula
Medtr3g082850 1.0kb upstream 1.0kb upstream 1000 false chr3: 37395329-37396328 Medicago truncatula
Medtr3g082850 1.0kb downstream 1.0kb downstream 5278 true chr3: 37396329-37401606 Medicago truncatula
Medtr3g082850 1.0kb downstream 1.0kb downstream 1000 false chr3: 37400607-37401606 Medicago truncatula
Medtr3g082850 2.0kb upstream 2.0kb upstream 6278 true chr3: 37394329-37400606 Medicago truncatula
Medtr3g082850 2.0kb upstream 2.0kb upstream 2000 false chr3: 37394329-37396328 Medicago truncatula
Medtr3g082850 2.0kb downstream 2.0kb downstream 6278 true chr3: 37396329-37402606 Medicago truncatula
Medtr3g082850 2.0kb downstream 2.0kb downstream 2000 false chr3: 37400607-37402606 Medicago truncatula
Medtr3g082850 5.0kb upstream 5.0kb upstream 9278 true chr3: 37391329-37400606 Medicago truncatula
Medtr3g082850 5.0kb upstream 5.0kb upstream 5000 false chr3: 37391329-37396328 Medicago truncatula
Medtr3g082850 5.0kb downstream 5.0kb downstream 9278 true chr3: 37396329-37405606 Medicago truncatula
Medtr3g082850 5.0kb downstream 5.0kb downstream 5000 false chr3: 37400607-37405606 Medicago truncatula
Medtr3g082850 10.0kb upstream 10.0kb upstream 14278 true chr3: 37386329-37400606 Medicago truncatula
Medtr3g082850 10.0kb upstream 10.0kb upstream 10000 false chr3: 37386329-37396328 Medicago truncatula
Medtr3g082850 10.0kb downstream 10.0kb downstream 14278 true chr3: 37396329-37410606 Medicago truncatula
Medtr3g082850 10.0kb downstream 10.0kb downstream 10000 false chr3: 37400607-37410606 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302798 5265 Fabidae View MSA
124066515 5270 Rosid View MSA
123745740 5271 Pentapetalae View MSA
122789386 5272 Eudicot View MSA
122050291 5273 Angiosperm View MSA
121350785 5274 Embryophyte View MSA
123428058 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.803        
cufflinks 5.567        
cufflinks 6.112        
cufflinks 4.48        
cufflinks 5.555        
cufflinks 2.411       Low
cufflinks 5.503        
cufflinks 5.259        
cufflinks 4.376        

0 Strain